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IPR038103 is a Cell division control protein 73, C-terminal domain superfamily.
<p>CDC73 is an RNA polymerase II accessory factor [[cite:PUB00019277]], and forms part of the Paf1 complex that has roles in post-initiation events [[cite:PUB00019278]]. More specifically, crystal structure analysis shows the C terminus to be a Ras-like domain that adopts a fold that is highly similar to GTPases of the Ras superfamily. The C-terminal domain contains a large but comparatively flat surface of highly conserved residues, devoid of ligand. Deletion of the Cdc73 C-domain significantly reduces Paf1C occupancy on active genes, which means that the Cdc73 C-domain plays a role in promoting association of Paf1C with chromatin [[cite:PUB00097396]]. The canonical nucleotide binding pocket is altered in CDC73, and there is no nucleotide ligand, but it contributes to histone methylation and Paf1 complex (Paf1C) recruitment to active genes. Thus, together with Rtf1, it combines to couple Paf1C to elongating polymerase [[cite:PUB00019279]].</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PHP; TAIR: AT3G22590.1 PLANT HOMOLOGOUS TO PARAFIBROMIN; Swiss-Prot: sp|Q9LJ87|CDC73_ARATH Protein CDC73 homolog; TrEMBL-Plants: tr|A0A0L9TBV0|A0A0L9TBV0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0452400 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
PTHR12466 | PANTHER | 1 | 100.00 |