Domain Predictions — View

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PF04083

Source: Pfam

Description

Partial alpha/beta-hydrolase lipase region

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0006629 View details of GO:0006629 AmiGO InterPro QuickGO	Biological process	Lipid metabolic process	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.	Subterm of GO:0044238 GO:0071704

Associated Lotus transcripts 17

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0269449.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: lipase 1-like [Glycine max] gi\|356531228\|ref\|XP_003534180.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1820 IPR006693 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PTHR11005 PTHR11005:SF17 SSF53474 TMhelix TRANSMEMBRANE mobidb-lite	12
Lj0g3v0349529.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: triacylglycerol lipase 2-like [Glycine max] gi\|356551259\|ref\|XP_003543994.1\|	Domains G3DSA:3.40.50.1820 IPR006693 IPR025483 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PIRSF000862 PTHR11005 PTHR11005:SF41 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53474 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	17
Lj1g3v3834380.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: triacylglycerol lipase 2-like [Glycine max] gi\|356558723\|ref\|XP_003547652.1\|	Domains G3DSA:3.40.50.1820 IPR006693 IPR025483 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PIRSF000862 PTHR11005 PTHR11005:SF38 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53474 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix	17
Lj2g3v0764320.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: lipase 1-like [Glycine max] gi\|356531228\|ref\|XP_003534180.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1820 IPR006693 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PTHR11005 PTHR11005:SF17 SSF53474 TMhelix TRANSMEMBRANE mobidb-lite	12
Lj2g3v0764320.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: lipase 1-like [Glycine max] gi\|356531228\|ref\|XP_003534180.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1820 IPR006693 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PTHR11005 PTHR11005:SF17 SSF53474 TMhelix TRANSMEMBRANE mobidb-lite	12
Lj2g3v2876120.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: triacylglycerol lipase 2-like isoform X2 [Cicer arietinum] gi\|502097817\|ref\|XP_004491088.1\|	Domains G3DSA:3.40.50.1820 IPR006693 IPR025483 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PIRSF000862 PTHR11005 PTHR11005:SF41 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53474 SignalP-TM_EUK	15
Lj6g3v0204560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: triacylglycerol lipase 2-like [Glycine max] gi\|356528679\|ref\|XP_003532927.1\|	Domains G3DSA:3.40.50.1820 IPR006693 IPR025483 IPR029058 PF04083 PIRSF000862 PTHR11005 PTHR11005:SF41 SSF53474	9
LotjaGi1g1v0068200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipase; TAIR: AT5G14180.1 Myzus persicae-induced lipase 1; Swiss-Prot: sp\|Q67ZU1\|LIP2_ARATH Triacylglycerol lipase 2; TrEMBL-Plants: tr\|A0A151QTN0\|A0A151QTN0_CAJCA Lipase; Found in the gene: LotjaGi1g1v0068200	Domains G3DSA:3.40.50.1820 IPR006693 IPR025483 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PIRSF000862 PTHR11005 PTHR11005:SF107 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53474 SignalP-TM	15
LotjaGi1g1v0623200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipase; TAIR: AT5G14180.1 Myzus persicae-induced lipase 1; Swiss-Prot: sp\|Q67ZU1\|LIP2_ARATH Triacylglycerol lipase 2; TrEMBL-Plants: tr\|I1MLJ1\|I1MLJ1_SOYBN Lipase; Found in the gene: LotjaGi1g1v0623200	Domains G3DSA:3.40.50.1820 IPR006693 IPR025483 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PIRSF000862 PTHR11005 PTHR11005:SF99 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53474 SignalP-TM SignalP-noTM TMhelix	17
LotjaGi2g1v0087500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipase; TAIR: AT5G14180.1 Myzus persicae-induced lipase 1; Swiss-Prot: sp\|Q67ZU1\|LIP2_ARATH Triacylglycerol lipase 2; TrEMBL-Plants: tr\|A0A151RNF5\|A0A151RNF5_CAJCA Lipase; Found in the gene: LotjaGi2g1v0087500	Domains G3DSA:3.40.50.1820 IPR006693 IPR025483 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PIRSF000862 PTHR11005 PTHR11005:SF99 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53474 SignalP-TM SignalP-noTM	16
LotjaGi2g1v0211900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipase family protein; TAIR: AT1G73920.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp\|Q8K2A6\|LIPM_MOUSE Lipase member M; TrEMBL-Plants: tr\|K7LEQ9\|K7LEQ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0211900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1820 IPR006693 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PTHR11005 PTHR11005:SF105 SSF53474 TMhelix TRANSMEMBRANE mobidb-lite	12
LotjaGi4g1v0451200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipase family protein; TAIR: AT1G73920.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp\|Q8K2A6\|LIPM_MOUSE Lipase member M; TrEMBL-Plants: tr\|G7L902\|G7L902_MEDTR Alpha/beta hydrolase family protein; Found in the gene: LotjaGi4g1v0451200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1820 IPR006693 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PTHR11005 PTHR11005:SF105 SSF53474 TMhelix TRANSMEMBRANE mobidb-lite	12
LotjaGi4g1v0451200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipase family protein; TAIR: AT1G73920.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp\|Q8K2A6\|LIPM_MOUSE Lipase member M; TrEMBL-Plants: tr\|G7L902\|G7L902_MEDTR Alpha/beta hydrolase family protein; Found in the gene: LotjaGi4g1v0451200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1820 IPR006693 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PTHR11005 PTHR11005:SF105 SSF53474 TMhelix TRANSMEMBRANE mobidb-lite	12
LotjaGi4g1v0451200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipase family protein; TAIR: AT1G73920.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp\|Q8K2A6\|LIPM_MOUSE Lipase member M; TrEMBL-Plants: tr\|G7L902\|G7L902_MEDTR Alpha/beta hydrolase family protein; Found in the gene: LotjaGi4g1v0451200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1820 IPR006693 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PTHR11005 PTHR11005:SF105 SSF53474 TMhelix TRANSMEMBRANE mobidb-lite	12
LotjaGi4g1v0451200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipase family protein; TAIR: AT1G73920.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp\|Q8K2A6\|LIPM_MOUSE Lipase member M; TrEMBL-Plants: tr\|G7L902\|G7L902_MEDTR Alpha/beta hydrolase family protein; Found in the gene: LotjaGi4g1v0451200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1820 IPR006693 IPR029058 NON_CYTOPLASMIC_DOMAIN PF04083 PTHR11005 PTHR11005:SF105 SSF53474 TMhelix TRANSMEMBRANE mobidb-lite	12
LotjaGi6g1v0034800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipase; TAIR: AT5G14180.1 Myzus persicae-induced lipase 1; Swiss-Prot: sp\|Q67ZU1\|LIP2_ARATH Triacylglycerol lipase 2; TrEMBL-Plants: tr\|A0A151R994\|A0A151R994_CAJCA Lipase; Found in the gene: LotjaGi6g1v0034800	Domains G3DSA:3.40.50.1820 IPR006693 IPR025483 IPR029058 PF04083 PIRSF000862 PTHR11005 PTHR11005:SF107 SSF53474	9
LotjaGi6g1v0034800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipase; TAIR: AT5G14180.1 Myzus persicae-induced lipase 1; Swiss-Prot: sp\|Q67ZU1\|LIP2_ARATH Triacylglycerol lipase 2; TrEMBL-Plants: tr\|A0A151R994\|A0A151R994_CAJCA Lipase; Found in the gene: LotjaGi6g1v0034800	Domains G3DSA:3.40.50.1820 IPR006693 IPR025483 IPR029058 PF04083 PIRSF000862 PTHR11005 PTHR11005:SF107 SSF53474	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF53474	SUPERFAMILY	1	5.88