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Photosystem II 10 kDa polypeptide PsbR
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Photosystem II | A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center. | ||
| Cellular component | Photosystem II oxygen evolving complex | A complex, composed of a cluster of manganese, calcium and chloride ions bound to extrinsic proteins, that catalyzes the splitting of water to O2 and 4 H+. In cyanobacteria there are five extrinsic proteins in OEC (PsbO, PsbP-like, PsbQ-like, PsbU and PsbV), while in plants there are only three (PsbO, PsbP and PsbQ). | ||
| Biological process | Photosynthesis | The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds. | ||
| Cellular component | Thylakoid membrane | The pigmented membrane of any thylakoid. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like [Fragaria vesca subsp]. vesca] gi|470116076|ref|XP_004294212.1| | 9 | ||
| – | Photosystem II 10 kDa polypeptide family protein; TAIR: AT1G79040.1 photosystem II subunit R; Swiss-Prot: sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloroplastic; TrEMBL-Plants: tr|I3SHR8|I3SHR8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0141700 | 14 | ||
| – | Photosystem II 10 kDa polypeptide family protein; TAIR: AT1G79040.1 photosystem II subunit R; Swiss-Prot: sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloroplastic; TrEMBL-Plants: tr|I3SHR8|I3SHR8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0141700 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 33.33 |