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PF06422

Source: Pfam

Description

CDR ABC transporter

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0016021
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Subterm of
GO:0042626
Molecular function ATPase activity, coupled to transmembrane movement of substances Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
Subterm of
GO:0055085
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
Subterm of

Associated Lotus transcripts 2

Transcript Name Description Predicted domains Domain count
LotjaGi4g1v0036500_LC.2
– ABC transporter G family member; TAIR: AT3G21090.1 ABC-2 type transporter family protein; Swiss-Prot: sp|Q8RWI9|AB15G_ARATH ABC transporter G family member 15; TrEMBL-Plants: tr|G7JCQ3|G7JCQ3_MEDTR White-brown-complex ABC transporter family protein, putative; Found in the gene: LotjaGi4g1v0036500_LC
Domains
10
LotjaGi4g1v0036500_LC.4
– ABC transporter G family member; TAIR: AT3G21090.1 ABC-2 type transporter family protein; Swiss-Prot: sp|Q8RWI9|AB15G_ARATH ABC transporter G family member 15; TrEMBL-Plants: tr|G7JCQ3|G7JCQ3_MEDTR White-brown-complex ABC transporter family protein, putative; Found in the gene: LotjaGi4g1v0036500_LC
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 50.00