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PF12872

Source: Pfam

Description

OST-HTH/LOTUS domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 18

Transcript Name Description Predicted domains Domain count
Lj1g3v1255830.1
– Limkain-b1 [Medicago truncatula] gi|357464505|ref|XP_003602534.1|
Domains
13
Lj2g3v3248940.1
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356552675|ref|XP_003544688.1|
Domains
18
Lj6g3v0792120.1
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356527124|ref|XP_003532163.1|
Domains
19
Lj6g3v0792120.2
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356527124|ref|XP_003532163.1|
Domains
20
Lj6g3v0792120.3
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356527124|ref|XP_003532163.1|
Domains
19
Lj6g3v0792120.4
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356527124|ref|XP_003532163.1|
Domains
19
LotjaGi1g1v0019200.1
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|G7K4G1|G7K4G1_MEDTR RNA-binding domain CCCH-type zinc finger protein; Found in the gene: LotjaGi1g1v0019200
Domains
22
LotjaGi1g1v0019200.2
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|G7K4G1|G7K4G1_MEDTR RNA-binding domain CCCH-type zinc finger protein; Found in the gene: LotjaGi1g1v0019200
Domains
25
LotjaGi1g1v0019200.3
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|G7K4G1|G7K4G1_MEDTR RNA-binding domain CCCH-type zinc finger protein; Found in the gene: LotjaGi1g1v0019200
Domains
22
LotjaGi1g1v0019200.4
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|G7K4G1|G7K4G1_MEDTR RNA-binding domain CCCH-type zinc finger protein; Found in the gene: LotjaGi1g1v0019200
Domains
22
LotjaGi1g1v0315300.1
– Meiosis arrest female protein 1; TAIR: AT5G09840.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp|Q9Y4F3|MARF1_HUMAN Meiosis arrest female protein 1; TrEMBL-Plants: tr|A0A1J7GRS8|A0A1J7GRS8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0315300
Domains
13
LotjaGi4g1v0075500.1
– Meiosis arrest female protein 1-like protein; TAIR: AT2G15560.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp|Q8BJ34|MARF1_MOUSE Meiosis arrest female protein 1; TrEMBL-Plants: tr|I1JDZ7|I1JDZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075500
Domains
13
LotjaGi4g1v0075500.2
– Meiosis arrest female protein 1-like protein; TAIR: AT2G15560.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp|Q8BJ34|MARF1_MOUSE Meiosis arrest female protein 1; TrEMBL-Plants: tr|I1JDZ7|I1JDZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075500
Domains
13
LotjaGi4g1v0075500.3
– Meiosis arrest female protein 1-like protein; TAIR: AT2G15560.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp|Q8BJ34|MARF1_MOUSE Meiosis arrest female protein 1; TrEMBL-Plants: tr|I1JDZ7|I1JDZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075500
Domains
13
LotjaGi6g1v0149000.1
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|A0A0B2NQX3|A0A0B2NQX3_GLYSO Zinc finger CCCH domain-containing protein 18; Found in the gene: LotjaGi6g1v0149000
Domains
23
LotjaGi6g1v0149000.2
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|A0A0R0IVN5|A0A0R0IVN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0149000
Domains
22
LotjaGi6g1v0149000.3
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|A0A0B2NQX3|A0A0B2NQX3_GLYSO Zinc finger CCCH domain-containing protein 18; Found in the gene: LotjaGi6g1v0149000
Domains
22
LotjaGi6g1v0149000.4
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|A0A0R0IVN5|A0A0R0IVN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0149000
Domains
22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd12458 CDD 1 5.56