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PS00178

Source: ProSitePatterns

Description

Aminoacyl-transfer RNA synthetases class-I signature.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000166
Molecular function Nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
Subterm of
GO:0004812
Molecular function Aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006418
Biological process TRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis.
Subterm of
Part of

Associated Lotus transcripts 60

Transcript Name Description Predicted domains Domain count
Lj0g3v0063869.1
– PREDICTED: valine--tRNA ligase-like [Cicer arietinum] gi|502091866|ref|XP_004489655.1|
Domains
14
Lj0g3v0166889.1
– PREDICTED: tryptophanyl-tRNA synthetase-like [Glycine max] gi|356518366|ref|XP_003527850.1|
Domains
22
Lj0g3v0203509.1
– PREDICTED: tyrosine--tRNA ligase-like [Cicer arietinum] gi|502129554|ref|XP_004500343.1|
Domains
24
Lj1g3v3137930.1
– PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Glycine max] gi|356497127|ref|XP_003517414.1|
Domains
24
Lj2g3v0878950.1
– PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502164060|ref|XP_004513035.1|
Domains
24
Lj2g3v0879000.1
– PREDICTED: arginine--tRNA ligase, cytoplasmic-like isoform X1 [Cicer arietinum] gi|502164143|ref|XP_004513061.1|
Domains
24
Lj2g3v0879000.3
– PREDICTED: arginine--tRNA ligase, cytoplasmic-like isoform X1 [Cicer arietinum] gi|502164143|ref|XP_004513061.1|
Domains
15
Lj3g3v0461620.1
– PREDICTED: tyrosine--tRNA ligase-like [Cicer arietinum] gi|502129554|ref|XP_004500343.1|
Domains
24
Lj3g3v0642560.1
– PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like [Cicer arietinum] gi|502155737|ref|XP_004510174.1|
Domains
23
Lj3g3v3032100.1
– PREDICTED: leucine--tRNA ligase, cytoplasmic-like isoform X1 [Cicer arietinum] gi|502147203|ref|XP_004506691.1|
Domains
23
Lj3g3v3032100.2
– PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Glycine max] gi|356497127|ref|XP_003517414.1|
Domains
23
Lj3g3v3599450.1
– PREDICTED: isoleucine--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502144299|ref|XP_004505648.1|
Domains
24
Lj3g3v3627890.1
– PREDICTED: probable methionyl-tRNA synthetase-like [Glycine max] gi|356543424|ref|XP_003540160.1|
Domains
30
Lj4g3v0134610.2
– PREDICTED: leucyl-tRNA synthetase-like [Glycine max] gi|356522021|ref|XP_003529648.1|
Domains
35
Lj4g3v0134610.3
– PREDICTED: leucyl-tRNA synthetase-like [Glycine max] gi|356522021|ref|XP_003529648.1|
Domains
34
Lj4g3v2120600.1
– PREDICTED: glutaminyl-tRNA synthetase-like isoform 1 [Glycine max] gi|356536302|ref|XP_003536678.1|
Domains
28
Lj5g3v1533470.1
– PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like [Glycine max] gi|356534931|ref|XP_003536004.1|
Domains
33
Lj5g3v2028360.1
– PREDICTED: valyl-tRNA synthetase-like isoform 1 [Glycine max] gi|356535908|ref|XP_003536484.1|
Domains
16
Lj6g3v0819090.1
– PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Glycine max] gi|356497127|ref|XP_003517414.1|
Domains
23
Lj6g3v1445620.1
– PREDICTED: isoleucine--tRNA ligase-like [Cicer arietinum] gi|502085158|ref|XP_004487851.1|
Domains
28
LotjaGi1g1v0409200.1
– Tryptophan-tRNA ligase; TAIR: AT2G25840.2 Nucleotidylyl transferase superfamily protein; Swiss-Prot: sp|Q8RXE9|SYWM_ARATH Tryptophan--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151RK76|A0A151RK76_CAJCA Tryptophanyl-tRNA synthetase; Found in the gene: LotjaGi1g1v0409200
Domains
22
LotjaGi1g1v0529100.1
– Leucine--tRNA ligase; TAIR: AT1G09620.1 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase; Swiss-Prot: sp|F4I116|SYLC_ARATH Leucine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1J9U5|I1J9U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0529100
Domains
21
LotjaGi1g1v0529100.2
– Leucine--tRNA ligase; TAIR: AT1G09620.1 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase; Swiss-Prot: sp|F4I116|SYLC_ARATH Leucine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1J9U5|I1J9U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0529100
Domains
20
LotjaGi2g1v0111300.1
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
27
LotjaGi2g1v0111300.2
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
31
LotjaGi2g1v0111300.4
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
31
LotjaGi2g1v0111300.6
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
31
LotjaGi2g1v0111300.7
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
31
LotjaGi2g1v0226300.1
– Arginine--tRNA ligase; TAIR: AT4G26300.1 Arginyl-tRNA synthetase, class Ic; Swiss-Prot: sp|O23247|SYRM_ARATH Arginine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|W0G2X0|W0G2X0_9FABA Arginyl-tRNA synthetase; Found in the gene: LotjaGi2g1v0226300
Domains
26
LotjaGi2g1v0226700.1
– Arginine--tRNA ligase; TAIR: AT4G26300.5 Arginyl-tRNA synthetase, class Ic; Swiss-Prot: sp|O23247|SYRM_ARATH Arginine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072UDN7|A0A072UDN7_MEDTR Cytoplasmic-like arginine-tRNA ligase; Found in the gene: LotjaGi2g1v0226700
Domains
26
LotjaGi3g1v0053200.1
– Tyrosine--tRNA ligase; TAIR: AT3G02660.1 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; Swiss-Prot: sp|Q9M876|SYYM_ARATH Tyrosine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072UXA5|A0A072UXA5_MEDTR Tyrosine--tRNA ligase; Found in the gene: LotjaGi3g1v0053200
Domains
24
LotjaGi3g1v0068700.1
– Tryptophan-tRNA ligase; TAIR: AT3G04600.1 Nucleotidylyl transferase superfamily protein; Swiss-Prot: sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|A0A151TGC9|A0A151TGC9_CAJCA Tryptophanyl-tRNA synthetase, cytoplasmic; Found in the gene: LotjaGi3g1v0068700
Domains
14
LotjaGi3g1v0068700.2
– Tryptophan-tRNA ligase; TAIR: AT3G04600.1 Nucleotidylyl transferase superfamily protein; Swiss-Prot: sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|A0A1J7GMT2|A0A1J7GMT2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0068700
Domains
14
LotjaGi3g1v0068700.3
– Tryptophan-tRNA ligase; TAIR: AT3G04600.1 Nucleotidylyl transferase superfamily protein; Swiss-Prot: sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|A0A1J7GMT2|A0A1J7GMT2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0068700
Domains
17
LotjaGi3g1v0075100.1
– Glutamate--tRNA ligase; TAIR: AT5G64050.1 glutamate tRNA synthetase; Swiss-Prot: sp|Q9FEA2|SYEM_ARATH Glutamate--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|V7ALD7|V7ALD7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0075100
Domains
25
LotjaGi3g1v0484200.2
– Leucine--tRNA ligase; TAIR: AT1G09620.1 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase; Swiss-Prot: sp|F4I116|SYLC_ARATH Leucine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1J9U5|I1J9U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0484200
Domains
20
LotjaGi3g1v0484200.3
– Leucine--tRNA ligase; TAIR: AT1G09620.1 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase; Swiss-Prot: sp|F4I116|SYLC_ARATH Leucine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1J9U5|I1J9U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0484200
Domains
20
LotjaGi3g1v0535700.1
– Isoleucine-tRNA ligase; TAIR: AT4G10320.1 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|F4JLM5|SYIC_ARATH Isoleucine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|A0A0S3SEB7|A0A0S3SEB7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0535700
Domains
23
LotjaGi3g1v0538600.1
– Methionine-tRNA ligase, putative; TAIR: AT4G13780.1 methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS; Swiss-Prot: sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase; TrEMBL-Plants: tr|A0A0B2SPF8|A0A0B2SPF8_GLYSO Putative methionine--tRNA ligase; Found in the gene: LotjaGi3g1v0538600
Domains
32
LotjaGi3g1v0538600.2
– Methionine-tRNA ligase, putative; TAIR: AT4G13780.1 methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS; Swiss-Prot: sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase; TrEMBL-Plants: tr|A0A0R0H9H8|A0A0R0H9H8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538600
Domains
24
LotjaGi3g1v0538600.3
– Methionine-tRNA ligase, putative; TAIR: AT4G13780.1 methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS; Swiss-Prot: sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase; TrEMBL-Plants: tr|A0A0R0H0Q5|A0A0R0H0Q5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538600
Domains
24
LotjaGi4g1v0011900.1
– Leucine--tRNA ligase; TAIR: AT4G04350.1 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q9XEA0|SYLM_ARATH Leucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7JJA8|G7JJA8_MEDTR Leucyl-tRNA synthetase; Found in the gene: LotjaGi4g1v0011900
Domains
35
LotjaGi4g1v0011900.2
– Leucine--tRNA ligase; TAIR: AT4G04350.1 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q9XEA0|SYLM_ARATH Leucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7JJA8|G7JJA8_MEDTR Leucyl-tRNA synthetase; Found in the gene: LotjaGi4g1v0011900
Domains
35
LotjaGi4g1v0011900.3
– Leucine--tRNA ligase; TAIR: AT4G04350.1 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q9XEA0|SYLM_ARATH Leucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I1KNG6|I1KNG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0011900
Domains
29
LotjaGi4g1v0303500.1
– Glutamine--tRNA ligase; TAIR: AT1G25350.1 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS; Swiss-Prot: sp|P52780|SYQ_LUPLU Glutamine--tRNA ligase; TrEMBL-Plants: tr|A0A0B2PPT7|A0A0B2PPT7_GLYSO Glutamine--tRNA ligase; Found in the gene: LotjaGi4g1v0303500
Domains
29
LotjaGi5g1v0005200.1
– Glutamate--tRNA ligase; TAIR: AT5G26710.1 Glutamyl/glutaminyl-tRNA synthetase, class Ic; Swiss-Prot: sp|O82462|SYEC_ARATH Glutamate--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|A0A0L9TZ06|A0A0L9TZ06_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0005200
Domains
27
LotjaGi5g1v0235000.1
– Glutamate--tRNA ligase; TAIR: AT5G26710.1 Glutamyl/glutaminyl-tRNA synthetase, class Ic; Swiss-Prot: sp|O82462|SYEC_ARATH Glutamate--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|A0A0L9TZ06|A0A0L9TZ06_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0235000
Domains
31
LotjaGi5g1v0305000.1
– Valine--tRNA ligase; TAIR: AT1G14610.1 valyl-tRNA synthetase / valine-tRNA ligase (VALRS); Swiss-Prot: sp|P93736|SYVM1_ARATH Valine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr|A0A151U9X6|A0A151U9X6_CAJCA Valyl-tRNA synthetase; Found in the gene: LotjaGi5g1v0305000
Domains
27
LotjaGi5g1v0305000.2
– Valine--tRNA ligase; TAIR: AT1G14610.1 valyl-tRNA synthetase / valine-tRNA ligase (VALRS); Swiss-Prot: sp|P93736|SYVM1_ARATH Valine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr|A0A151U9X6|A0A151U9X6_CAJCA Valyl-tRNA synthetase; Found in the gene: LotjaGi5g1v0305000
Domains
27
LotjaGi5g1v0305000.3
– Valine--tRNA ligase; TAIR: AT1G14610.1 valyl-tRNA synthetase / valine-tRNA ligase (VALRS); Swiss-Prot: sp|P93736|SYVM1_ARATH Valine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr|A0A151U9X6|A0A151U9X6_CAJCA Valyl-tRNA synthetase; Found in the gene: LotjaGi5g1v0305000
Domains
33
LotjaGi5g1v0305000.4
– Valine--tRNA ligase; TAIR: AT1G14610.1 valyl-tRNA synthetase / valine-tRNA ligase (VALRS); Swiss-Prot: sp|P93736|SYVM1_ARATH Valine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr|A0A151U9X6|A0A151U9X6_CAJCA Valyl-tRNA synthetase; Found in the gene: LotjaGi5g1v0305000
Domains
26
LotjaGi6g1v0104800.1
– Tyrosine--tRNA ligase; TAIR: AT3G02660.1 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; Swiss-Prot: sp|Q9M876|SYYM_ARATH Tyrosine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072UXA5|A0A072UXA5_MEDTR Tyrosine--tRNA ligase; Found in the gene: LotjaGi6g1v0104800
Domains
24
LotjaGi6g1v0104800.2
– Tyrosine--tRNA ligase; TAIR: AT3G02660.1 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; Swiss-Prot: sp|Q9M876|SYYM_ARATH Tyrosine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072V2K0|A0A072V2K0_MEDTR Tyrosine--tRNA ligase; Found in the gene: LotjaGi6g1v0104800
Domains
23
LotjaGi6g1v0153700.1
– Leucine--tRNA ligase; TAIR: AT1G09620.1 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase; Swiss-Prot: sp|F4I116|SYLC_ARATH Leucine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1J9U5|I1J9U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0153700
Domains
20
LotjaGi6g1v0153700.2
– Leucine--tRNA ligase; TAIR: AT1G09620.1 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase; Swiss-Prot: sp|F4I116|SYLC_ARATH Leucine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1J9U5|I1J9U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0153700
Domains
20
LotjaGi6g1v0153700.3
– Leucine--tRNA ligase; TAIR: AT1G09620.1 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase; Swiss-Prot: sp|F4I116|SYLC_ARATH Leucine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1J9U5|I1J9U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0153700
Domains
20
LotjaGi6g1v0249900.1
– Isoleucine-tRNA ligase; TAIR: AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q8RXK8|SYIM_ARATH Isoleucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072V611|A0A072V611_MEDTR Isoleucine-tRNA ligase; Found in the gene: LotjaGi6g1v0249900
Domains
29
LotjaGi6g1v0249900.2
– Isoleucine-tRNA ligase; TAIR: AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q8RXK8|SYIM_ARATH Isoleucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072V611|A0A072V611_MEDTR Isoleucine-tRNA ligase; Found in the gene: LotjaGi6g1v0249900
Domains
28
LotjaGi6g1v0249900.3
– Isoleucine-tRNA ligase; TAIR: AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q8RXK8|SYIM_ARATH Isoleucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072V611|A0A072V611_MEDTR Isoleucine-tRNA ligase; Found in the gene: LotjaGi6g1v0249900
Domains
27
LotjaGi6g1v0249900.4
– Isoleucine-tRNA ligase; TAIR: AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q8RXK8|SYIM_ARATH Isoleucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072V611|A0A072V611_MEDTR Isoleucine-tRNA ligase; Found in the gene: LotjaGi6g1v0249900
Domains
29

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 1.67