Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR22835:SF239

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 18

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0082529.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Enod8.3, partial [Medicago truncatula] gi\|18390043\|gb\|AAL68830.1\|AF463407_1	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 PF00657 PTHR22835 PTHR22835:SF239	6
Lj0g3v0093549.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Early nodulin [Medicago truncatula] gi\|357438603\|ref\|XP_003589577.1\|	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 NON_CYTOPLASMIC_DOMAIN PF00657 PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52266 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE cd01837	16
Lj0g3v0266049.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Enod8.3 [Medicago truncatula] gi\|357438621\|ref\|XP_003589586.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1110 IPR013830 NON_CYTOPLASMIC_DOMAIN PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix TRANSMEMBRANE	14
Lj0g3v0357029.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GDSL esterase/lipase At5g14450-like [Glycine max] gi\|356511662\|ref\|XP_003524542.1\|	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 NON_CYTOPLASMIC_DOMAIN PF00657 PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52266 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TMhelix cd01837	17
Lj1g3v3641890.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GDSL esterase/lipase At3g27950-like [Cicer arietinum] gi\|502090599\|ref\|XP_004489280.1\|	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 NON_CYTOPLASMIC_DOMAIN PF00657 PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52266 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK cd01837	15
Lj1g3v3689960.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GDSL esterase/lipase At5g14450-like [Cicer arietinum] gi\|502102147\|ref\|XP_004491983.1\|	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 NON_CYTOPLASMIC_DOMAIN PF00657 PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52266 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE cd01837	16
Lj1g3v3690000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GDSL esterase/lipase At5g14450-like [Cicer arietinum] gi\|502102147\|ref\|XP_004491983.1\|	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 NON_CYTOPLASMIC_DOMAIN PF00657 PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52266 SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE cd01837	15
Lj1g3v3690000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GDSL esterase/lipase At5g14450-like [Cicer arietinum] gi\|502102147\|ref\|XP_004491983.1\|	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 NON_CYTOPLASMIC_DOMAIN PF00657 PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE cd01837	14
Lj1g3v3809450.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Enod8.3, partial [Medicago truncatula] gi\|18390043\|gb\|AAL68830.1\|AF463407_1	Domains Coil G3DSA:3.40.50.1110 IPR001087 IPR013830 PF00657 PTHR22835 PTHR22835:SF239 SSF52266	8
Lj1g3v4752590.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: esterase-like [Glycine max] gi\|356550865\|ref\|XP_003543803.1\|	Domains G3DSA:3.40.50.1110 IPR013830 PTHR22835 PTHR22835:SF239	4
Lj1g3v4752600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Enod8-like protein [Medicago truncatula] gi\|18390047\|gb\|AAL68833.1\|AF463408_1	Domains PTHR22835 PTHR22835:SF239	3
Lj2g3v1012910.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GDSL esterase/lipase At5g14450-like [Glycine max] gi\|356511662\|ref\|XP_003524542.1\|	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 NON_CYTOPLASMIC_DOMAIN PF00657 PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52266 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TMhelix cd01837	17
Lj3g3v0370400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Early nodulin [Medicago truncatula] gi\|357438601\|ref\|XP_003589576.1\|	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 NON_CYTOPLASMIC_DOMAIN PF00657 PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM_EUK cd01837	13
Lj3g3v3086150.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: esterase-like [Glycine max] gi\|356552673\|ref\|XP_003544687.1\|	Domains G3DSA:3.40.50.1110 IPR013830 PTHR22835 PTHR22835:SF239	4
Lj4g3v2730360.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GDSL esterase/lipase [Arabidopsis thaliana] gi\|15231558\|ref\|NP_189274.1\|	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 NON_CYTOPLASMIC_DOMAIN PF00657 PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK	13
Lj4g3v2730360.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GDSL esterase/lipase At3g26430-like [Cicer arietinum] gi\|502140246\|ref\|XP_004504128.1\|	Domains G3DSA:3.40.50.1110 IPR013830 NON_CYTOPLASMIC_DOMAIN PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK	11
Lj4g3v2730360.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GDSL esterase/lipase At3g26430-like [Cicer arietinum] gi\|502140246\|ref\|XP_004504128.1\|	Domains G3DSA:3.40.50.1110 IPR013830 NON_CYTOPLASMIC_DOMAIN PTHR22835 PTHR22835:SF239 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK	11
Lj5g3v1849460.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: esterase-like [Glycine max] gi\|356552673\|ref\|XP_003544687.1\|	Domains G3DSA:3.40.50.1110 IPR001087 IPR013830 PF00657 PTHR22835 PTHR22835:SF239 SSF52266	7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF52266	SUPERFAMILY	1	5.56