Domain Predictions — View

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PTHR42893:SF1

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0446700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DETOXIFICATION; TAIR: AT2G38330.1 MATE efflux family protein; Swiss-Prot: sp\|Q84K71\|DTX44_ARATH Protein DETOXIFICATION 44, chloroplastic; TrEMBL-Plants: tr\|K7L1Y8\|K7L1Y8_SOYBN Protein DETOXIFICATION; Found in the gene: LotjaGi1g1v0446700	Domains CYTOPLASMIC_DOMAIN IPR002528 NON_CYTOPLASMIC_DOMAIN PF01554 PTHR42893 PTHR42893:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM TMhelix TRANSMEMBRANE mobidb-lite	14
LotjaGi1g1v0446700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DETOXIFICATION; TAIR: AT2G38330.1 MATE efflux family protein; Swiss-Prot: sp\|Q84K71\|DTX44_ARATH Protein DETOXIFICATION 44, chloroplastic; TrEMBL-Plants: tr\|K7L1Y8\|K7L1Y8_SOYBN Protein DETOXIFICATION; Found in the gene: LotjaGi1g1v0446700	Domains CYTOPLASMIC_DOMAIN IPR002528 NON_CYTOPLASMIC_DOMAIN PF01554 PTHR42893 PTHR42893:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM TIGR00797 TMhelix TRANSMEMBRANE cd13136 mobidb-lite	16
LotjaGi1g1v0446700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DETOXIFICATION; TAIR: AT2G38330.1 MATE efflux family protein; Swiss-Prot: sp\|Q84K71\|DTX44_ARATH Protein DETOXIFICATION 44, chloroplastic; TrEMBL-Plants: tr\|K7L1Y8\|K7L1Y8_SOYBN Protein DETOXIFICATION; Found in the gene: LotjaGi1g1v0446700	Domains CYTOPLASMIC_DOMAIN IPR002528 NON_CYTOPLASMIC_DOMAIN PF01554 PTHR42893 PTHR42893:SF1 TIGR00797 TMhelix TRANSMEMBRANE	9
LotjaGi1g1v0446700.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DETOXIFICATION; TAIR: AT2G38330.1 MATE efflux family protein; Swiss-Prot: sp\|Q84K71\|DTX44_ARATH Protein DETOXIFICATION 44, chloroplastic; TrEMBL-Plants: tr\|A0A0B2PTS6\|A0A0B2PTS6_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi1g1v0446700	Domains CYTOPLASMIC_DOMAIN IPR002528 NON_CYTOPLASMIC_DOMAIN PF01554 PTHR42893 PTHR42893:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM TIGR00797 TMhelix TRANSMEMBRANE cd13136	15
LotjaGi2g1v0067100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DETOXIFICATION; TAIR: AT2G38330.1 MATE efflux family protein; Swiss-Prot: sp\|Q84K71\|DTX44_ARATH Protein DETOXIFICATION 44, chloroplastic; TrEMBL-Plants: tr\|A0A151T9A5\|A0A151T9A5_CAJCA Protein DETOXIFICATION; Found in the gene: LotjaGi2g1v0067100_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR42893 PTHR42893:SF1 TMhelix TRANSMEMBRANE	7
LotjaGi2g1v0067200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DETOXIFICATION; TAIR: AT2G38330.1 MATE efflux family protein; Swiss-Prot: sp\|Q84K71\|DTX44_ARATH Protein DETOXIFICATION 44, chloroplastic; TrEMBL-Plants: tr\|I1N322\|I1N322_SOYBN Protein DETOXIFICATION; Found in the gene: LotjaGi2g1v0067200_LC	Domains CYTOPLASMIC_DOMAIN IPR002528 NON_CYTOPLASMIC_DOMAIN PF01554 PTHR42893 PTHR42893:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix TRANSMEMBRANE	12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	16.67