Domain Predictions — View

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SSF55545

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0256609.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: beta-hexosaminidase 2-like [Cicer arietinum] gi\|502087608\|ref\|XP_004488586.1\|	Domains G3DSA:3.20.20.80 G3DSA:3.30.379.10 IPR013781 IPR015883 IPR017853 IPR025705 IPR029018 IPR029019 NON_CYTOPLASMIC_DOMAIN PF00728 PF14845 PIRSF001093 PR00738 PTHR22600 PTHR22600:SF14 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SSF55545 cd06562	22
Lj0g3v0287929.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: beta-hexosaminidase 1-like [Cicer arietinum] gi\|502102461\|ref\|XP_004492083.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.379.10 IPR029018 IPR029019 NON_CYTOPLASMIC_DOMAIN PF14845 PTHR22600 PTHR22600:SF16 SSF55545 TMhelix TRANSMEMBRANE	11
LotjaGi3g1v0129400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-hexosaminidase; TAIR: AT1G05590.1 beta-hexosaminidase 2; Swiss-Prot: sp\|Q9SYK0\|HEXO2_ARATH Beta-hexosaminidase 2; TrEMBL-Plants: tr\|A0A0L9UIQ8\|A0A0L9UIQ8_PHAAN Beta-hexosaminidase; Found in the gene: LotjaGi3g1v0129400	Domains G3DSA:3.20.20.80 G3DSA:3.30.379.10 IPR015883 IPR017853 IPR025705 IPR029018 IPR029019 NON_CYTOPLASMIC_DOMAIN PF00728 PF14845 PIRSF001093 PR00738 PTHR22600 PTHR22600:SF43 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SSF55545 cd06562	21
LotjaGi4g1v0176200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-hexosaminidase; TAIR: AT3G55260.1 beta-hexosaminidase 1; Swiss-Prot: sp\|A7WM73\|HEXO1_ARATH Beta-hexosaminidase 1; TrEMBL-Plants: tr\|D7TM08\|D7TM08_VITVI Beta-hexosaminidase; Found in the gene: LotjaGi4g1v0176200_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.379.10 IPR029018 IPR029019 NON_CYTOPLASMIC_DOMAIN PF14845 PTHR22600 PTHR22600:SF40 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF55545 TMhelix TRANSMEMBRANE	15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	25.00