Domain Predictions — View

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TIGR02103

Source: TIGRFAM

Description

pullul_strch: alpha-1,6-glucosidases, pullulanase-type

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005975 View details of GO:0005975 AmiGO InterPro QuickGO	Biological process	Carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.	Subterm of GO:0044238 GO:0071704
GO:0051060 View details of GO:0051060 AmiGO InterPro QuickGO	Molecular function	Pullulanase activity	Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in pullulan (a linear polymer of alpha-(1,6)-linked maltotriose units) and in amylopectin and glycogen, and the a- and b-limit dextrins of amylopectin and glycogen.	Subterm of GO:0004553

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj5g3v1698870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pullulanase 1, chloroplastic-like isoform X1 [Cicer arietinum] gi\|502118156\|ref\|XP_004496127.1\|	Domains G3DSA:2.60.40.10 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR011839 IPR013781 IPR013783 IPR014756 IPR015902 IPR017853 IPR024561 NON_CYTOPLASMIC_DOMAIN PF02922 PF11852 PTHR10357 PTHR10357:SF99 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00642 SSF51011 SSF51445 SSF81296 SignalP-TM_GRAM_POSITIVE TIGR02103 cd02860 cd11341	28
LotjaGi5g1v0254800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1,4-alpha-glucan branching enzyme GlgB; TAIR: AT5G04360.1 limit dextrinase; Swiss-Prot: sp\|Q8GTR4\|PULA1_ARATH Pullulanase 1, chloroplastic; TrEMBL-Plants: tr\|A0A072VMS0\|A0A072VMS0_MEDTR Alpha-1,6-glucosidase, pullulanase-type protein; Found in the gene: LotjaGi5g1v0254800	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1130 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR011839 IPR013783 IPR014756 IPR017853 IPR024561 IPR040671 NON_CYTOPLASMIC_DOMAIN PF02922 PF11852 PF17967 PTHR43631 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00642 SSF51011 SSF51445 SSF81296 SignalP-TM TIGR02103 cd02860 cd11341	28
LotjaGi5g1v0254800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Debranching enzyme 1; TAIR: AT5G04360.1 limit dextrinase; Swiss-Prot: sp\|Q8GTR4\|PULA1_ARATH Pullulanase 1, chloroplastic; TrEMBL-Plants: tr\|A0A072VMS0\|A0A072VMS0_MEDTR Alpha-1,6-glucosidase, pullulanase-type protein; Found in the gene: LotjaGi5g1v0254800	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1130 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR011839 IPR013780 IPR013783 IPR014756 IPR017853 IPR024561 IPR040671 NON_CYTOPLASMIC_DOMAIN PF02922 PF11852 PF17967 PTHR43631 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00642 SSF51011 SSF51445 SSF81296 SignalP-TM TIGR02103 cd02860 cd11341	30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd11341	CDD	1	33.33