Domain Predictions — View

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cd10241

Source: CDD

Description

HSPA5-like_NBD

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v3014490.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: luminal-binding protein-like [Cicer arietinum] gi\|502138932\|ref\|XP_004503582.1\|	Domains Coil G3DSA:1.20.1270.10 G3DSA:2.60.34.10 G3DSA:3.30.30.30 G3DSA:3.30.420.40 G3DSA:3.90.640.10 IPR013126 IPR018181 IPR029047 IPR029048 NON_CYTOPLASMIC_DOMAIN PF00012 PR00301 PS00297 PS00329 PS01036 PS51257 PTHR19375 PTHR19375:SF228 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF100920 SSF100934 SSF53067 SignalP-noTM_EUK TMhelix cd10241 mobidb-lite	30
LotjaGi1g1v0771400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Heat shock 70 kDa protein; TAIR: AT5G42020.1 Heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp\|Q03684\|BIP4_TOBAC Luminal-binding protein 4; TrEMBL-Plants: tr\|V4TAP7\|V4TAP7_9ROSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0771400	Domains Coil G3DSA:1.20.1270.10 G3DSA:2.60.34.10 G3DSA:3.30.420.40 G3DSA:3.90.640.10 IPR013126 IPR018181 IPR029047 IPR029048 IPR042050 IPR043129 NON_CYTOPLASMIC_DOMAIN PF00012 PR00301 PS00297 PS00329 PS01036 PTHR19375 PTHR19375:SF377 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF100920 SSF100934 SSF53067 SignalP-noTM TMhelix cd10241	29
LotjaGi4g1v0437900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Heat shock 70 kDa protein; TAIR: AT5G42020.1 Heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp\|Q03685\|BIP5_TOBAC Luminal-binding protein 5; TrEMBL-Plants: tr\|A0A0A0KKD9\|A0A0A0KKD9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi4g1v0437900	Domains Coil G3DSA:1.20.1270.10 G3DSA:2.60.34.10 G3DSA:3.30.420.40 G3DSA:3.90.640.10 IPR013126 IPR018181 IPR029047 IPR029048 IPR042050 IPR043129 NON_CYTOPLASMIC_DOMAIN PF00012 PR00301 PS00297 PS00329 PS01036 PS51257 PTHR19375 PTHR19375:SF377 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF100920 SSF100934 SSF53067 SignalP-noTM TMhelix cd10241 mobidb-lite	31

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33