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GO:0019773

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description Proteasome core complex, alpha-subunit complex
Full defintion The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus.
Subterm of

Relationships

The relationship of GO:0019773 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCrb
PMID
Primary structural features of the 20S proteasome subunits of rice (Oryza sativa).Sassa H, Oguchi S, Inoue T, Hirano H
Gene. 2000 May 30; 250 (1-2): 61–6.PMID: 10854779

The 20S proteasome is the proteolytic complex that is involved in removing abnormal proteins, and it also has other diverse biological functions. Its structure comprises 28 subunits arranged in four rings of seven subunits, and exists as a hollow cylinder. The two outer rings and two inner rings form an alpha7beta7beta7alpha7 structure, and each subunit, alpha and beta, exists as seven different types, thus giving 14 kinds of subunits. In this study, we report the primary structures of the 14 proteasomal subunit subfamilies in rice (Oryza sativa), representing the first set for all of the subunits from monocots. Amino acid sequence homology within the rice family (alpha-type: 28.9-42.1%; beta-type: 17.2-31. 9%) were lower than those between rice subunits and corresponding orthologs from Arabidopsis and yeast (alpha-type: 49.2-94.5%; beta-type: 34.8-87.7%). Structural features observed in eukaryotic proteasome subunits, i.e., alpha- or beta-type signature at the N-termini, Thr active sites in beta1, beta2 and beta5 subunits, and nuclear localization signal-like sequences in some alpha-type subunits, were shown to be conserved in rice.

Associated Lotus transcripts 32

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0069859.1
– PREDICTED: proteasome subunit alpha type-7 [Vitis vinifera] gi|225428005|ref|XP_002278162.1|
GO terms
3
Lj0g3v0363779.1
– 20S proteasome alpha subunit G1 [Theobroma cacao] gi|508785767|gb|EOY33023.1|
GO terms
3
Lj0g3v0363779.2
– PREDICTED: proteasome subunit alpha type-3-like [Cicer arietinum] gi|502091750|ref|XP_004489625.1|
GO terms
3
Lj1g3v2375870.1
– PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Glycine max] gi|356496249|ref|XP_003516981.1|
GO terms
3
Lj1g3v4916360.1
– PREDICTED: proteasome subunit alpha type-2-A-like [Cicer arietinum] gi|502153994|ref|XP_004509539.1|
GO terms
3
Lj2g3v1979680.1
– PREDICTED: proteasome subunit alpha type-7-like [Glycine max] gi|356559270|ref|XP_003547923.1|
GO terms
3
Lj5g3v0108300.1
– PREDICTED: proteasome subunit alpha type-1-B-like [Cicer arietinum] gi|502126081|ref|XP_004499172.1|
GO terms
3
Lj5g3v2240990.1
– 20S proteasome alpha subunit E2 isoform 2 [Theobroma cacao] gi|508780133|gb|EOY27389.1|
GO terms
4
LotjaGi1g1v0445900.1
– Proteasome subunit alpha type; TAIR: AT3G22110.1 20S proteasome alpha subunit C1; Swiss-Prot: sp|O81148|PSA4A_ARATH Proteasome subunit alpha type-4-A; TrEMBL-Plants: tr|I3S0L1|I3S0L1_MEDTR Proteasome subunit alpha type; Found in the gene: LotjaGi1g1v0445900
GO terms
3
LotjaGi1g1v0445900.2
– Proteasome subunit alpha type; TAIR: AT3G22110.1 20S proteasome alpha subunit C1; Swiss-Prot: sp|O81148|PSA4A_ARATH Proteasome subunit alpha type-4-A; TrEMBL-Plants: tr|I3S0L1|I3S0L1_MEDTR Proteasome subunit alpha type; Found in the gene: LotjaGi1g1v0445900
GO terms
3
LotjaGi1g1v0445900.3
– Proteasome subunit alpha type; TAIR: AT3G22110.1 20S proteasome alpha subunit C1; Swiss-Prot: sp|O81148|PSA4A_ARATH Proteasome subunit alpha type-4-A; TrEMBL-Plants: tr|I3S0L1|I3S0L1_MEDTR Proteasome subunit alpha type; Found in the gene: LotjaGi1g1v0445900
GO terms
3
LotjaGi1g1v0445900.4
– Proteasome subunit alpha type; TAIR: AT3G22110.1 20S proteasome alpha subunit C1; Swiss-Prot: sp|O81148|PSA4A_ARATH Proteasome subunit alpha type-4-A; TrEMBL-Plants: tr|I3S0L1|I3S0L1_MEDTR Proteasome subunit alpha type; Found in the gene: LotjaGi1g1v0445900
GO terms
3
LotjaGi1g1v0445900.5
– Proteasome subunit alpha type; TAIR: AT3G22110.1 20S proteasome alpha subunit C1; Swiss-Prot: sp|O81148|PSA4A_ARATH Proteasome subunit alpha type-4-A; TrEMBL-Plants: tr|I3S0L1|I3S0L1_MEDTR Proteasome subunit alpha type; Found in the gene: LotjaGi1g1v0445900
GO terms
3
LotjaGi1g1v0445900.6
– Proteasome subunit alpha type; TAIR: AT4G15165.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; Swiss-Prot: sp|F4JJE5|PSA4B_ARATH Putative proteasome subunit alpha type-4-B; TrEMBL-Plants: tr|I3S0L1|I3S0L1_MEDTR Proteasome subunit alpha type; Found in the gene: LotjaGi1g1v0445900
GO terms
3
LotjaGi1g1v0445900.7
– Proteasome subunit alpha type; TAIR: AT3G22110.1 20S proteasome alpha subunit C1; Swiss-Prot: sp|O81148|PSA4A_ARATH Proteasome subunit alpha type-4-A; TrEMBL-Plants: tr|I3S0L1|I3S0L1_MEDTR Proteasome subunit alpha type; Found in the gene: LotjaGi1g1v0445900
GO terms
3
LotjaGi1g1v0767900.1
– Proteasome subunit alpha type; TAIR: AT1G16470.1 proteasome subunit PAB1; Swiss-Prot: sp|O23708|PSA2A_ARATH Proteasome subunit alpha type-2-A; TrEMBL-Plants: tr|I3SFE3|I3SFE3_MEDTR Proteasome subunit alpha type; Found in the gene: LotjaGi1g1v0767900
GO terms
3
LotjaGi1g1v0767900.2
– Proteasome subunit alpha type; TAIR: AT1G16470.1 proteasome subunit PAB1; Swiss-Prot: sp|A2YVR7|PSA2_ORYSI Proteasome subunit alpha type-2; TrEMBL-Plants: tr|A0A0S3TCR9|A0A0S3TCR9_PHAAN Proteasome subunit alpha type; Found in the gene: LotjaGi1g1v0767900
GO terms
3
LotjaGi2g1v0410600.1
– Proteasome subunit alpha type; TAIR: AT5G66140.1 proteasome alpha subunit D2; Swiss-Prot: sp|Q9SXU1|PSA7_CICAR Proteasome subunit alpha type-7; TrEMBL-Plants: tr|A0A0L9TPU8|A0A0L9TPU8_PHAAN Proteasome subunit alpha type; Found in the gene: LotjaGi2g1v0410600
GO terms
3
LotjaGi3g1v0135900.1
– Proteasome subunit alpha type; TAIR: AT1G16470.1 proteasome subunit PAB1; Swiss-Prot: sp|O23708|PSA2A_ARATH Proteasome subunit alpha type-2-A; TrEMBL-Plants: tr|I3SFE3|I3SFE3_MEDTR Proteasome subunit alpha type; Found in the gene: LotjaGi3g1v0135900
GO terms
3
LotjaGi3g1v0198400.1
– Proteasome subunit alpha type; TAIR: AT3G22110.1 20S proteasome alpha subunit C1; Swiss-Prot: sp|O81148|PSA4A_ARATH Proteasome subunit alpha type-4-A; TrEMBL-Plants: tr|A0A0B2P141|A0A0B2P141_GLYSO Proteasome subunit alpha type; Found in the gene: LotjaGi3g1v0198400
GO terms
3
LotjaGi3g1v0198400.2
– Proteasome subunit alpha type; TAIR: AT3G22110.1 20S proteasome alpha subunit C1; Swiss-Prot: sp|O81148|PSA4A_ARATH Proteasome subunit alpha type-4-A; TrEMBL-Plants: tr|A0A0B2P141|A0A0B2P141_GLYSO Proteasome subunit alpha type; Found in the gene: LotjaGi3g1v0198400
GO terms
3
LotjaGi3g1v0198400.3
– Proteasome subunit alpha type; TAIR: AT3G22110.1 20S proteasome alpha subunit C1; Swiss-Prot: sp|O81148|PSA4A_ARATH Proteasome subunit alpha type-4-A; TrEMBL-Plants: tr|A0A0B2P141|A0A0B2P141_GLYSO Proteasome subunit alpha type; Found in the gene: LotjaGi3g1v0198400
GO terms
3
LotjaGi3g1v0198400.4
– Proteasome subunit alpha type; TAIR: AT4G15165.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; Swiss-Prot: sp|F4JJE5|PSA4B_ARATH Putative proteasome subunit alpha type-4-B; TrEMBL-Plants: tr|A0A0B2P141|A0A0B2P141_GLYSO Proteasome subunit alpha type; Found in the gene: LotjaGi3g1v0198400
GO terms
3
LotjaGi3g1v0323300.1
– Proteasome subunit alpha type; TAIR: AT5G35590.1 proteasome alpha subunit A1; Swiss-Prot: sp|O48551|PSA6_SOYBN Proteasome subunit alpha type-6; TrEMBL-Plants: tr|I3T518|I3T518_LOTJA Proteasome subunit alpha type; Found in the gene: LotjaGi3g1v0323300
GO terms
3
LotjaGi3g1v0323300.2
– Proteasome subunit alpha type; TAIR: AT5G35590.1 proteasome alpha subunit A1; Swiss-Prot: sp|O48551|PSA6_SOYBN Proteasome subunit alpha type-6; TrEMBL-Plants: tr|I3T518|I3T518_LOTJA Proteasome subunit alpha type; Found in the gene: LotjaGi3g1v0323300
GO terms
3
LotjaGi4g1v0130000.1
– Proteasome subunit alpha type; TAIR: AT5G66140.1 proteasome alpha subunit D2; Swiss-Prot: sp|Q9SXU1|PSA7_CICAR Proteasome subunit alpha type-7; TrEMBL-Plants: tr|A0A0L9TPU8|A0A0L9TPU8_PHAAN Proteasome subunit alpha type; Found in the gene: LotjaGi4g1v0130000
GO terms
3
LotjaGi5g1v0014300.1
– Proteasome subunit alpha type; TAIR: AT5G42790.1 proteasome alpha subunit F1; Swiss-Prot: sp|P34066|PSA1A_ARATH Proteasome subunit alpha type-1-A; TrEMBL-Plants: tr|A0A0S3RQB5|A0A0S3RQB5_PHAAN Proteasome subunit alpha type; Found in the gene: LotjaGi5g1v0014300
GO terms
3
LotjaGi5g1v0345600.1
– Proteasome subunit alpha type; TAIR: AT3G14290.1 20S proteasome alpha subunit E2; Swiss-Prot: sp|Q9LSU1|PSA5_ORYSJ Proteasome subunit alpha type-5; TrEMBL-Plants: tr|I3S0W6|I3S0W6_LOTJA Proteasome subunit alpha type; Found in the gene: LotjaGi5g1v0345600
GO terms
4
LotjaGi5g1v0345600.2
– Proteasome subunit alpha type; TAIR: AT3G14290.1 20S proteasome alpha subunit E2; Swiss-Prot: sp|Q9LSU1|PSA5_ORYSJ Proteasome subunit alpha type-5; TrEMBL-Plants: tr|I3S0W6|I3S0W6_LOTJA Proteasome subunit alpha type; Found in the gene: LotjaGi5g1v0345600
GO terms
4
LotjaGi6g1v0082700.1
– Proteasome subunit alpha type; TAIR: AT2G27020.2 20S proteasome alpha subunit G1; Swiss-Prot: sp|O23715|PSA3_ARATH Proteasome subunit alpha type-3; TrEMBL-Plants: tr|I3STC4|I3STC4_LOTJA Proteasome subunit alpha type; Found in the gene: LotjaGi6g1v0082700
GO terms
3
LotjaGi6g1v0082700.2
– Proteasome subunit alpha type; TAIR: AT2G27020.1 20S proteasome alpha subunit G1; Swiss-Prot: sp|O24362|PSA3_SPIOL Proteasome subunit alpha type-3; TrEMBL-Plants: tr|I3STC4|I3STC4_LOTJA Proteasome subunit alpha type; Found in the gene: LotjaGi6g1v0082700
GO terms
3
LotjaGi6g1v0082700.3
– Proteasome subunit alpha type; TAIR: AT2G27020.2 20S proteasome alpha subunit G1; Swiss-Prot: sp|O24362|PSA3_SPIOL Proteasome subunit alpha type-3; TrEMBL-Plants: tr|I3STC4|I3STC4_LOTJA Proteasome subunit alpha type; Found in the gene: LotjaGi6g1v0082700
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0019773
Cellular component Proteasome core complex, alpha-subunit complex 1 3.13