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GO:0031011

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description Ino80 complex
Full defintion A multisubunit protein complex that contains the Ino80p ATPase; exhibits chromatin remodeling activity and 3' to 5' DNA helicase activity.
Subterm of

Relationships

The relationship of GO:0031011 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCrb
PMID
The biology of chromatin remodeling complexes.Clapier CR, Cairns BR
Annu Rev Biochem. 2009; 78 (): 273–304.PMID: 19355820

The packaging of chromosomal DNA by nucleosomes condenses and organizes the genome, but occludes many regulatory DNA elements. However, this constraint also allows nucleosomes and other chromatin components to actively participate in the regulation of transcription, chromosome segregation, DNA replication, and DNA repair. To enable dynamic access to packaged DNA and to tailor nucleosome composition in chromosomal regions, cells have evolved a set of specialized chromatin remodeling complexes (remodelers). Remodelers use the energy of ATP hydrolysis to move, destabilize, eject, or restructure nucleosomes. Here, we address many aspects of remodeler biology: their targeting, mechanism, regulation, shared and unique properties, and specialization for particular biological processes. We also address roles for remodelers in development, cancer, and human syndromes.

Associated Lotus transcripts 42

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0032719.1
– Nuclear factor related to kappa-B-binding protein [Medicago truncatula] gi|357508451|ref|XP_003624514.1|
GO terms
1
Lj0g3v0072839.1
– INO80 complex subunit C [Medicago truncatula] gi|357462405|ref|XP_003601484.1|
GO terms
2
Lj0g3v0300689.1
– Nuclear factor related to kappa-B-binding protein [Medicago truncatula] gi|357508451|ref|XP_003624514.1|
GO terms
1
Lj0g3v0300699.1
– Nuclear factor related to kappa-B-binding protein [Medicago truncatula] gi|357508451|ref|XP_003624514.1|
GO terms
1
Lj0g3v0325869.1
– Nuclear factor related to kappa-B-binding protein [Medicago truncatula] gi|357454025|ref|XP_003597293.1|
GO terms
1
Lj0g3v0325879.1
– Nuclear factor related to kappa-B-binding protein [Medicago truncatula] gi|357454025|ref|XP_003597293.1|
GO terms
1
Lj1g3v3904630.1
– Nuclear factor related to kappa-B-binding protein [Medicago truncatula] gi|357508451|ref|XP_003624514.1|
GO terms
1
Lj1g3v3904640.1
– Nuclear factor related to kappa-B-binding protein [Medicago truncatula] gi|357508451|ref|XP_003624514.1|
GO terms
1
Lj1g3v4849460.1
– PREDICTED: suppressor protein SRP40-like [Cicer arietinum] gi|502112743|ref|XP_004494429.1|
GO terms
2
Lj5g3v1135090.1
– PREDICTED: actin-related protein 9-like [Cicer arietinum] gi|502115892|ref|XP_004495311.1|
GO terms
2
Lj5g3v1145190.1
– PREDICTED: actin-related protein 9-like [Cicer arietinum] gi|502115892|ref|XP_004495311.1|
GO terms
2
LotjaGi1g1v0016800.1
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0016800
GO terms
4
LotjaGi1g1v0016800.2
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0016800
GO terms
4
LotjaGi1g1v0016800.3
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|Q9M3Z6|Q9M3Z6_CICAR RuvB-like helicase; Found in the gene: LotjaGi1g1v0016800
GO terms
4
LotjaGi1g1v0016800.4
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0016800
GO terms
4
LotjaGi1g1v0240100_LC.1
– RuvB-like helicase; TAIR: AT5G67630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P0CR29|RUVB2_CRYNB RuvB-like helicase 2; TrEMBL-Plants: tr|B9IFT1|B9IFT1_POPTR RuvB-like helicase; Found in the gene: LotjaGi1g1v0240100_LC
GO terms
4
LotjaGi1g1v0240100_LC.2
– RuvB-like helicase; TAIR: AT5G67630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P0CR29|RUVB2_CRYNB RuvB-like helicase 2; TrEMBL-Plants: tr|B9IFT1|B9IFT1_POPTR RuvB-like helicase; Found in the gene: LotjaGi1g1v0240100_LC
GO terms
4
LotjaGi1g1v0240100_LC.3
– RuvB-like helicase; TAIR: AT5G67630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P0CR29|RUVB2_CRYNB RuvB-like helicase 2; TrEMBL-Plants: tr|B9IFT1|B9IFT1_POPTR RuvB-like helicase; Found in the gene: LotjaGi1g1v0240100_LC
GO terms
4
LotjaGi1g1v0424900.1
– Forkhead-associated (FHA) domain protein; TAIR: AT3G54350.1 Forkhead-associated (FHA) domain-containing protein; Swiss-Prot: sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1; TrEMBL-Plants: tr|K7KHS6|K7KHS6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0424900
GO terms
3
LotjaGi1g1v0424900.2
– Microspherule protein 1; TAIR: AT3G54350.1 Forkhead-associated (FHA) domain-containing protein; Swiss-Prot: sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1; TrEMBL-Plants: tr|K7KHS6|K7KHS6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0424900
GO terms
3
LotjaGi1g1v0425600.1
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600
GO terms
4
LotjaGi1g1v0425600.2
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600
GO terms
4
LotjaGi1g1v0425600.3
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600
GO terms
4
LotjaGi1g1v0425600.4
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600
GO terms
4
LotjaGi1g1v0425600.5
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|A0A1J7HT38|A0A1J7HT38_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0425600
GO terms
4
LotjaGi1g1v0633800_LC.1
– Nuclear factor related to kappa-B-binding; TAIR: AT5G13950.1 nuclear factor kappa-B-binding protein; Swiss-Prot: sp|Q6P4L9|NFRKB_XENTR Nuclear factor related to kappa-B-binding protein; TrEMBL-Plants: tr|A0A072UCC1|A0A072UCC1_MEDTR Uncharacterized protein; Found in the gene: LotjaGi1g1v0633800_LC
GO terms
1
LotjaGi1g1v0633800_LC.2
– Nuclear factor kappa-B-binding protein, putative; TAIR: AT5G13950.3 nuclear factor kappa-B-binding protein; Swiss-Prot: sp|P62413|PGK_LACJO Phosphoglycerate kinase; TrEMBL-Plants: tr|A0A151S8P5|A0A151S8P5_CAJCA Nuclear factor connected with kappa-B-binding protein; Found in the gene: LotjaGi1g1v0633800_LC
GO terms
1
LotjaGi1g1v0633800_LC.3
– Nuclear factor related to kappa-B-binding; TAIR: AT5G13950.1 nuclear factor kappa-B-binding protein; Swiss-Prot: sp|Q6P4L9|NFRKB_XENTR Nuclear factor related to kappa-B-binding protein; TrEMBL-Plants: tr|A0A151S8P5|A0A151S8P5_CAJCA Nuclear factor connected with kappa-B-binding protein; Found in the gene: LotjaGi1g1v0633800_LC
GO terms
1
LotjaGi1g1v0670100.1
– DNA helicase INO80; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp|Q8RXS6|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr|I1N8X6|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100
GO terms
6
LotjaGi1g1v0670100.2
– DNA helicase INO80; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp|Q8RXS6|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr|I1N8X6|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100
GO terms
6
LotjaGi1g1v0670100.3
– DNA helicase; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp|Q8RXS6|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr|I1N8X6|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100
GO terms
6
LotjaGi1g1v0670100.4
– DNA helicase; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp|Q8RXS6|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr|I1N8X6|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100
GO terms
6
LotjaGi1g1v0759100.1
– HIT zinc finger,PAPA-1-like conserved region, putative; TAIR: AT2G47350.1 HIT zinc finger and PAPA-1-like domain-containing protein; Swiss-Prot: sp|Q99PT3|IN80B_MOUSE INO80 complex subunit B; TrEMBL-Plants: tr|K7KGE4|K7KGE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0759100
GO terms
2
LotjaGi2g1v0106300.1
– Nuclear factor related to kappa-B-binding; TAIR: AT5G13950.1 nuclear factor kappa-B-binding protein; Swiss-Prot: sp|Q6P4L9|NFRKB_XENTR Nuclear factor related to kappa-B-binding protein; TrEMBL-Plants: tr|A0A0B2NZH2|A0A0B2NZH2_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0106300
GO terms
1
LotjaGi3g1v0276700.1
– Nuclear factor related to kappa-B-binding protein; TAIR: AT3G45830.1 nuclear factor kappa-B-binding-like protein; Swiss-Prot: sp|Q6P4R8|NFRKB_HUMAN Nuclear factor related to kappa-B-binding protein; TrEMBL-Plants: tr|A0A0B2REE2|A0A0B2REE2_GLYSO Nuclear factor related to kappa-B-binding protein; Found in the gene: LotjaGi3g1v0276700
GO terms
1
LotjaGi4g1v0124300.1
– Forkhead-associated (FHA) domain protein; TAIR: AT3G54350.1 Forkhead-associated (FHA) domain-containing protein; Swiss-Prot: sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1; TrEMBL-Plants: tr|V7CD65|V7CD65_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0124300
GO terms
3
LotjaGi4g1v0370900_LC.1
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi4g1v0370900_LC
GO terms
4
LotjaGi4g1v0370900_LC.2
– RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi4g1v0370900_LC
GO terms
4
LotjaGi5g1v0183500.1
– Actin-related protein; TAIR: AT5G43500.2 actin-related protein 9; Swiss-Prot: sp|Q9LSW2|ARP9_ARATH Actin-related protein 9; TrEMBL-Plants: tr|K7LK97|K7LK97_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0183500
GO terms
2
LotjaGi6g1v0026800.1
– INO80 complex subunit C; TAIR: AT4G38495.1 chromatin-remodeling complex subunit; Swiss-Prot: sp|Q8BHA0|IN80C_MOUSE INO80 complex subunit C; TrEMBL-Plants: tr|I3SJK2|I3SJK2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0026800
GO terms
2
LotjaGi6g1v0026800.2
– INO80 complex subunit C; TAIR: AT4G38495.1 chromatin-remodeling complex subunit; Swiss-Prot: sp|Q8BHA0|IN80C_MOUSE INO80 complex subunit C; TrEMBL-Plants: tr|I3SJK2|I3SJK2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0026800
GO terms
2
LotjaGi6g1v0135200.1
– RuvB-like helicase; TAIR: AT5G67630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9DE27|RUVB2_XENLA RuvB-like 2; TrEMBL-Plants: tr|G7J268|G7J268_MEDTR RuvB-like helicase; Found in the gene: LotjaGi6g1v0135200
GO terms
4

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0097255
Cellular component R2TP complex 1 2.38