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Lj0g3v0057079.1

Overview

Field Value
Gene ID Lj0g3v0057079
Transcript ID Lj0g3v0057079.1
Lotus japonicus genome version MG20 v3.0
Description Mitochondrial substrate carrier family protein V [Medicago truncatula] gi|357478051|ref|XP_003609311.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24089
107 400 294 4.50E-207 –
PANTHER
PTHR24089:SF348
107 400 294 4.50E-207 –
ProSiteProfiles
PS50920
124 207 84 18.029
IPR018108
Gene3D
G3DSA:1.50.40.10
125 399 275 1.30E-80
IPR023395
SUPERFAMILY
SSF103506
125 395 271 3.66E-72
IPR023395
Pfam
PF00153
126 208 83 3.30E-18
IPR018108
PRINTS
PR00926
129 142 14 9.70E-27
IPR002067
PRINTS
PR00926
142 156 15 9.70E-27
IPR002067
PRINTS
PR00926
182 202 21 9.70E-27
IPR002067
Pfam
PF00153
218 305 88 3.60E-23
IPR018108
ProSiteProfiles
PS50920
218 302 85 24.98
IPR018108
PRINTS
PR00926
233 251 19 9.70E-27
IPR002067
PRINTS
PR00926
275 293 19 9.70E-27
IPR002067
ProSiteProfiles
PS50920
312 399 88 23.285
IPR018108
Pfam
PF00153
313 403 91 2.20E-22
IPR018108
PRINTS
PR00926
321 343 23 9.70E-27
IPR002067

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005347
Molecular function ATP transmembrane transporter activity Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other.
Subterm of
GO:0055085
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj0g3v0057079.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0057079.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.