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Lj0g3v0190879.1

Overview

Field	Value
Gene ID	Lj0g3v0190879
Transcript ID	Lj0g3v0190879.1
Lotus japonicus genome version	MG20 v3.0
Description	PREDICTED: serine-rich adhesin for platelets-like [Cicer arietinum] gi\|502121474\|ref\|XP_004497334.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
PANTHER	PTHR34536 View details on PTHR34536 Search for proteins/transripts with this domain View external data on PTHR34536	1	62	62	0	–
PANTHER	PTHR34536:SF1 View details on PTHR34536:SF1 Search for proteins/transripts with this domain View external data on PTHR34536:SF1	1	62	62	0	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	32	145	114	–	–
PANTHER	PTHR34536 View details on PTHR34536 Search for proteins/transripts with this domain View external data on PTHR34536	87	133	47	0	–
PANTHER	PTHR34536:SF1 View details on PTHR34536:SF1 Search for proteins/transripts with this domain View external data on PTHR34536:SF1	87	133	47	0	–
PANTHER	PTHR34536:SF1 View details on PTHR34536:SF1 Search for proteins/transripts with this domain View external data on PTHR34536:SF1	160	1345	1186	0	–
PANTHER	PTHR34536 View details on PTHR34536 Search for proteins/transripts with this domain View external data on PTHR34536	160	1345	1186	0	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	360	400	41	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	515	550	36	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	610	629	20	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	635	677	43	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	840	906	67	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	995	1047	53	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	1090	1210	121	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	1314	1353	40	–	–

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 21

Expression data

Expression pattern

Expression pattern of Lj0g3v0190879.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0190879.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.