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Lj0g3v0206069.1

Overview

Field Value
Gene ID Lj0g3v0206069
Transcript ID Lj0g3v0206069.1
Lotus japonicus genome version MG20 v3.0
Description FAD synthetase [Medicago truncatula] gi|357510801|ref|XP_003625689.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23293:SF9
93 351 259 1.10E-107 –
PANTHER
PTHR23293
93 351 259 1.10E-107 –
Gene3D
G3DSA:3.40.50.620
97 293 197 1.10E-42
IPR014729
SUPERFAMILY
SSF52402
110 287 178 2.09E-32 –
CDD
cd01713
135 292 158 3.72E-39
IPR002500
Pfam
PF01507
136 298 163 2.70E-19
IPR002500
Gene3D
G3DSA:3.40.980.10
357 462 106 8.40E-14
IPR001453
SUPERFAMILY
SSF53218
357 483 127 1.03E-16
IPR001453
SMART
SM00852
361 522 162 0.0011
IPR001453
Pfam
PF00994
362 462 101 1.70E-14
IPR001453

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of

Genome browser

LORE1 insertions 26

Expression data

Expression pattern

Expression pattern of Lj0g3v0206069.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0206069.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.