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Lj0g3v0208729.1

Overview

Field Value
Gene ID Lj0g3v0208729
Transcript ID Lj0g3v0208729.1
Lotus japonicus genome version MG20 v3.0
Description F3F19.5 [Arabidopsis thaliana] gi|4850386|gb|AAD31056.1|AC007357_5
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 599 599 6.60E-122
PANTHER 1 599 599 6.60E-122
Pfam 6 241 236 5.20E-19
MobiDBLite 125 153 29
MobiDBLite 190 245 56
MobiDBLite 257 318 62
MobiDBLite 330 368 39
MobiDBLite 420 446 27
MobiDBLite 514 533 20
MobiDBLite 552 599 48

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj0g3v0208729.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0208729.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.