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Lj0g3v0297069.1

Overview

Field Value
Gene ID Lj0g3v0297069
Transcript ID Lj0g3v0297069.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: mitochondrial substrate carrier family protein B-like isoform 1 [Glycine max] gi|356504350|ref|XP_003520959.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24089
13 244 232 1.40E-146 –
PANTHER
PTHR24089:SF307
13 244 232 1.40E-146 –
SUPERFAMILY
SSF103506
33 241 209 1.83E-52
IPR023395
Gene3D
G3DSA:1.50.40.10
33 244 212 1.60E-57
IPR023395
Pfam
PF00153
34 128 95 7.50E-20
IPR018108
ProSiteProfiles
PS50920
35 126 92 19.231
IPR018108
PRINTS
PR00926
40 53 14 2.60E-22
IPR002067
PRINTS
PR00926
53 67 15 2.60E-22
IPR002067
PRINTS
PR00926
101 121 21 2.60E-22
IPR002067
Pfam
PF00153
141 229 89 5.70E-24
IPR018108
ProSiteProfiles
PS50920
141 227 87 27.469
IPR018108
PRINTS
PR00926
156 174 19 2.60E-22
IPR002067
PRINTS
PR00926
200 218 19 2.60E-22
IPR002067

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005347
Molecular function ATP transmembrane transporter activity Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other.
Subterm of
GO:0055085
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
Subterm of

Genome browser

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj0g3v0297069.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0297069.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.