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Lj0g3v0308339.2

Overview

Field Value
Gene ID Lj0g3v0308339
Transcript ID Lj0g3v0308339.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: pleckstrin homology domain-containing family A member 8-like [Cicer arietinum] gi|502124104|ref|XP_004498387.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10219:SF34
1 218 218 2.80E-112 –
PANTHER
PTHR10219
1 218 218 2.80E-112 –
Gene3D
G3DSA:1.10.3520.10
18 216 199 7.70E-48
IPR014830
SUPERFAMILY
SSF110004
30 215 186 1.70E-44
IPR014830
Pfam
PF08718
35 175 141 2.20E-37
IPR014830

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0120009
Biological process Intermembrane lipid transfer The transport of lipids between membranes in which a lipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).
Subterm of
GO:0120013
Molecular function Intermembrane lipid transfer activity Enables the removal of a lipid from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane.
Subterm of

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj0g3v0308339.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0308339.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.