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Lj0g3v0314269.1

Overview

Field Value
Gene ID Lj0g3v0314269
Transcript ID Lj0g3v0314269.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description RecName: Full=G2/mitotic-specific cyclin-2; AltName: Full=B-like cyclin; AltName: Full=CycMs2gi|914863|emb|CAA57560.1| cycMs2 [Medicago sativa subsp]. x varia] gi|1168896|sp|P46278.1|CCNB2_MEDVA
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 24 24
PIRSF 3 416 414 1.60E-122
PANTHER 14 416 403 9.70E-204
PANTHER 14 416 403 9.70E-204
SUPERFAMILY 152 288 137 3.40E-47
Pfam 163 288 126 2.70E-44
Gene3D 178 282 105 3.00E-41
CDD 192 281 90 1.54E-22
ProSitePatterns 193 224 32
SMART 198 282 85 1.20E-25
Gene3D 283 408 126 8.60E-44
CDD 289 376 88 3.21E-16
SUPERFAMILY 290 407 118 3.65E-38
Pfam 291 405 115 3.20E-33
SMART 291 408 118 4.10E-35
SMART 295 377 83 1.00E-21

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Host cell nucleus A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.

Expression data

Expression pattern

Expression pattern of Lj0g3v0314269.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0314269.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.