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Lj0g3v0348489.1

Overview

Field Value
Gene ID Lj0g3v0348489
Transcript ID Lj0g3v0348489.1
Lotus japonicus genome version MG20 v3.0
Description Pathogenesis-related protein PR10 [Medicago truncatula] gi|357449115|ref|XP_003594834.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PRINTS
PR00634
2 22 21 7.70E-44
IPR024949
CDD
cd07816
5 150 146 3.14E-46 –
PANTHER
PTHR31213
5 157 153 2.80E-69 –
PANTHER
PTHR31213:SF11
5 157 153 2.80E-69 –
Gene3D
G3DSA:3.30.530.20
5 156 152 5.50E-51
IPR023393
SUPERFAMILY
SSF55961
6 157 152 1.80E-36 –
Pfam
PF00407
6 153 148 1.40E-23
IPR000916
PRINTS
PR00634
25 35 11 7.70E-44
IPR024949
PRINTS
PR00634
48 57 10 7.70E-44
IPR024949
PRINTS
PR00634
64 83 20 7.70E-44
IPR024949
PRINTS
PR00634
83 96 14 7.70E-44
IPR024949
ProSitePatterns
PS00451
87 119 33 –
IPR024949
PRINTS
PR00634
108 124 17 7.70E-44
IPR024949
PRINTS
PR00634
142 152 11 7.70E-44
IPR024949

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004864
Molecular function Protein phosphatase inhibitor activity Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from phosphorylated proteins.
Subterm of
GO:0006952
Biological process Defense response Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
Subterm of
GO:0009738
Biological process Abscisic acid-activated signaling pathway A series of molecular signals generated by the binding of the plant hormone abscisic acid (ABA) to a receptor, and ending with modulation of a cellular process, e.g. transcription.
Subterm of
Part of
GO:0010427
Molecular function Abscisic acid binding Interacting selectively and non-covalently with abscisic acid, plant hormones that regulate aspects of plant growth.
Subterm of
GO:0038023
Molecular function Signaling receptor activity Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0348489.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0348489.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.