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Lj0g3v0352649.1

Overview

Field Value
Gene ID Lj0g3v0352649
Transcript ID Lj0g3v0352649.1
Lotus japonicus genome version MG20 v3.0
Description 9/13-hydroperoxide lyase [Lotus japonicus] gi|323575357|dbj|BAJ78218.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF48264
19 89 71 8.91E-16
IPR001128
Gene3D
G3DSA:1.10.630.10
19 87 69 1.10E-10
IPR001128
Pfam
PF00067
19 87 69 4.50E-07
IPR001128
PANTHER
PTHR24286
20 104 85 3.40E-39 –
PANTHER
PTHR24286:SF76
20 104 85 3.40E-39 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005506
Molecular function Iron ion binding Interacting selectively and non-covalently with iron (Fe) ions.
Subterm of
GO:0016705
Molecular function Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
Subterm of
GO:0020037
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0352649.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0352649.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.