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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0270330 |
| Transcript ID | Lj1g3v0270330.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: multiple RNA-binding domain-containing protein 1-like [Cicer arietinum] gi|502109477|ref|XP_004493655.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | – | – | |
| PANTHER | 17 | 35 | 19 | 6.90E-62 | – | |
| PANTHER | 17 | 35 | 19 | 6.90E-62 | – | |
| SUPERFAMILY | 119 | 210 | 92 | 1.61E-15 | ||
| PANTHER | 119 | 200 | 82 | 6.90E-62 | – | |
| Gene3D | 119 | 203 | 85 | 8.40E-16 | ||
| PANTHER | 119 | 200 | 82 | 6.90E-62 | – | |
| ProSiteProfiles | 122 | 194 | 73 | 11.111 | ||
| CDD | 122 | 193 | 72 | 7.66E-34 | – | |
| SMART | 123 | 190 | 68 | 8.50E-07 | ||
| Pfam | 124 | 187 | 64 | 7.50E-07 | ||
| Gene3D | 224 | 328 | 105 | 3.40E-20 | ||
| PANTHER | 231 | 262 | 32 | 6.90E-62 | – | |
| PANTHER | 231 | 262 | 32 | 6.90E-62 | – | |
| SUPERFAMILY | 240 | 419 | 180 | 2.04E-36 | ||
| CDD | 242 | 323 | 82 | 5.91E-29 | – | |
| ProSiteProfiles | 242 | 325 | 84 | 13.84 | ||
| SMART | 243 | 321 | 79 | 1.30E-15 | ||
| Pfam | 244 | 318 | 75 | 2.40E-11 | ||
| Gene3D | 331 | 421 | 91 | 1.40E-23 | ||
| PANTHER | 333 | 420 | 88 | 6.90E-62 | – | |
| PANTHER | 333 | 420 | 88 | 6.90E-62 | – | |
| ProSiteProfiles | 342 | 418 | 77 | 17.251 | ||
| CDD | 342 | 416 | 75 | 7.33E-35 | – | |
| SMART | 343 | 414 | 72 | 2.40E-18 | ||
| Pfam | 344 | 411 | 68 | 2.20E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj1g3v0270330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0270330.1, powered by CORGI.
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