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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0395780 |
| Transcript ID | Lj1g3v0395780.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Pleckstrin homology domain-containing family M member [Medicago truncatula] gi|357461933|ref|XP_003601248.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 36 | 36 | – | – | |
| MobiDBLite | 75 | 96 | 22 | – | – | |
| MobiDBLite | 131 | 174 | 44 | – | – | |
| PANTHER | 213 | 259 | 47 | 0 | – | |
| PANTHER | 213 | 259 | 47 | 0 | – | |
| MobiDBLite | 234 | 300 | 67 | – | – | |
| PANTHER | 328 | 955 | 628 | 0 | – | |
| PANTHER | 328 | 955 | 628 | 0 | – | |
| MobiDBLite | 410 | 431 | 22 | – | – | |
| Gene3D | 505 | 632 | 128 | 4.20E-17 | ||
| CDD | 510 | 612 | 103 | 7.17E-16 | – | |
| ProSiteProfiles | 515 | 634 | 120 | 11.046 | ||
| SUPERFAMILY | 528 | 633 | 106 | 2.75E-18 | ||
| Pfam | 529 | 629 | 101 | 8.40E-08 | ||
| Pfam | 715 | 918 | 204 | 7.70E-55 | ||
| SMART | 715 | 922 | 208 | 1.10E-80 | ||
| MobiDBLite | 967 | 990 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphatidylinositol binding | Interacting selectively and non-covalently with any inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives. |
Expression pattern of Lj1g3v0395780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0395780.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.