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Lj1g3v1079700.1

Overview

Field Value
Gene ID Lj1g3v1079700
Transcript ID Lj1g3v1079700.1
Lotus japonicus genome version MG20 v3.0
Description S-adenosyl-L-methionine: caffeic acid 3-0-methyltransferase [Medicago sativa] gi|261889456|gb|ACY06328.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF005739
1 363 363 4.60E-148
IPR016461
PANTHER
PTHR11746:SF106
2 364 363 1.50E-236 –
PANTHER
PTHR11746
2 364 363 1.50E-236 –
Gene3D
G3DSA:1.10.10.10
6 115 110 8.20E-45
IPR011991
SUPERFAMILY
SSF46785
15 119 105 1.63E-34
IPR011991
ProSiteProfiles
PS51683
24 363 340 76.402
IPR016461
Pfam
PF08100
34 85 52 1.40E-22
IPR012967
Gene3D
G3DSA:3.40.50.150
119 361 243 1.00E-77
IPR029063
SUPERFAMILY
SSF53335
121 360 240 7.60E-72
IPR029063
Pfam
PF00891
129 349 221 1.00E-90
IPR001077
CDD
cd02440
204 295 92 2.88E-05 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj1g3v1079700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1079700.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.