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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1991550 |
| Transcript ID | Lj1g3v1991550.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nucleolysin TIAR-like [Glycine max] gi|356515545|ref|XP_003526460.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 8 | 8 | 7.90E-110 | – | |
| PANTHER | 1 | 8 | 8 | 7.90E-110 | – | |
| PANTHER | 43 | 218 | 176 | 7.90E-110 | – | |
| Gene3D | 43 | 132 | 90 | 4.90E-16 | ||
| PANTHER | 43 | 218 | 176 | 7.90E-110 | – | |
| ProSiteProfiles | 57 | 131 | 75 | 13.226 | ||
| SMART | 58 | 127 | 70 | 3.70E-10 | ||
| Pfam | 60 | 124 | 65 | 2.40E-11 | ||
| SUPERFAMILY | 60 | 212 | 153 | 5.20E-38 | ||
| Gene3D | 135 | 214 | 80 | 1.20E-26 | ||
| ProSiteProfiles | 136 | 214 | 79 | 16.023 | ||
| SMART | 137 | 210 | 74 | 4.20E-22 | ||
| CDD | 137 | 211 | 75 | 2.57E-47 | – | |
| Pfam | 138 | 208 | 71 | 6.10E-18 | ||
| MobiDBLite | 213 | 258 | 46 | – | – | |
| Gene3D | 242 | 334 | 93 | 6.10E-22 | ||
| SUPERFAMILY | 244 | 336 | 93 | 9.13E-23 | ||
| CDD | 258 | 331 | 74 | 9.42E-36 | – | |
| ProSiteProfiles | 258 | 332 | 75 | 16.193 | ||
| SMART | 259 | 328 | 70 | 3.40E-16 | ||
| Pfam | 260 | 326 | 67 | 4.30E-14 | ||
| PANTHER | 396 | 431 | 36 | 7.90E-110 | – | |
| PANTHER | 396 | 431 | 36 | 7.90E-110 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj1g3v1991550.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1991550.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.