Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v2097280.1

Overview

Field Value
Gene ID Lj1g3v2097280
Transcript ID Lj1g3v2097280.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphoenolpyruvate carboxykinase [ATP] gi|356507971|ref|XP_003522736.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 53 53 – –
MobiDBLite
mobidb-lite
67 87 21 – –
PANTHER
PTHR30031:SF4
93 673 581 0 –
PANTHER
PTHR30031
93 673 581 0 –
Hamap
MF_00453
155 670 516 46.259
IPR001272
TIGRFAM
TIGR00224
159 662 504 1.60E-216
IPR001272
SUPERFAMILY
SSF68923
160 358 199 8.72E-72
IPR008210
CDD
cd00484
160 664 505 0
IPR001272
Pfam
PF01293
161 628 468 4.60E-209
IPR001272
Gene3D
G3DSA:3.40.449.10
161 358 198 2.10E-86
IPR008210
SUPERFAMILY
SSF53795
360 666 307 1.53E-123 –
Gene3D
G3DSA:3.90.228.20
360 422 63 1.60E-119
IPR013035
ProSitePatterns
PS00532
397 412 16 –
IPR015994
Gene3D
G3DSA:3.90.228.20
483 662 180 1.60E-119
IPR013035

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004611
Molecular function Phosphoenolpyruvate carboxykinase activity Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.
Subterm of
GO:0004612
Molecular function Phosphoenolpyruvate carboxykinase (ATP) activity Catalysis of the reaction: ATP + oxaloacetate = ADP + CO(2) + H(+) + phosphoenolpyruvate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006094
Biological process Gluconeogenesis The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.
Subterm of
GO:0017076
Molecular function Purine nucleotide binding Interacting selectively and non-covalently with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj1g3v2097280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2097280.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.