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Lj1g3v2280620.1

Overview

Field Value
Gene ID Lj1g3v2280620
Transcript ID Lj1g3v2280620.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: WD repeat-containing protein DWA2-like [Glycine max] gi|356508796|ref|XP_003523140.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR14205
2 345 344 6.10E-175 –
PANTHER
PTHR14205:SF15
2 345 344 6.10E-175 –
SUPERFAMILY
SSF50978
19 340 322 6.10E-28
IPR017986
Gene3D
G3DSA:2.130.10.10
25 340 316 4.30E-28
IPR015943
SMART
SM00320
55 97 43 420
IPR001680
SMART
SM00320
109 149 41 68
IPR001680
ProSiteProfiles
PS50294
164 290 127 11.682
IPR017986
SMART
SM00320
199 237 39 17
IPR001680
SMART
SM00320
241 281 41 0.0025
IPR001680
ProSiteProfiles
PS50082
248 280 33 9.005
IPR001680
SMART
SM00320
302 342 41 6.3
IPR001680

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 26

Expression data

Expression pattern

Expression pattern of Lj1g3v2280620.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2280620.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.