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Lj1g3v2954760.2

Overview

Field Value
Gene ID Lj1g3v2954760
Transcript ID Lj1g3v2954760.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] gi|124360970|gb|ABN08942.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32303
16 556 541 0 –
PANTHER
PTHR32303:SF5
16 556 541 0 –
Gene3D
G3DSA:2.140.10.10
48 555 508 1.00E-84
IPR027295
SUPERFAMILY
SSF50998
49 519 471 2.24E-70
IPR011047
Pfam
PF13360
93 331 239 3.20E-11
IPR002372
SMART
SM00564
97 128 32 2.00E-04
IPR018391
SMART
SM00564
153 187 35 55
IPR018391
SMART
SM00564
199 245 47 470
IPR018391
SMART
SM00564
268 334 67 160
IPR018391
SMART
SM00564
420 468 49 860
IPR018391
Pfam
PF13360
452 530 79 7.30E-10
IPR002372
SMART
SM00564
478 512 35 2.00E-09
IPR018391

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj1g3v2954760.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2954760.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.