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Lj1g3v3329970.1

Overview

Field Value
Gene ID Lj1g3v3329970
Transcript ID Lj1g3v3329970.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: G2/mitotic-specific cyclin-1-like [Glycine max] gi|356510570|ref|XP_003524010.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF001771
16 362 347 2.60E-129 –
PANTHER
PTHR10177:SF250
44 360 317 2.30E-245 –
PANTHER
PTHR10177
44 360 317 2.30E-245 –
SUPERFAMILY
SSF47954
99 235 137 5.10E-49
IPR013763
Pfam
PF00134
110 235 126 1.90E-45
IPR006671
Gene3D
G3DSA:1.10.472.10
126 229 104 7.70E-44
IPR013763
CDD
cd00043
139 228 90 5.36E-24 –
ProSitePatterns
PS00292
140 171 32 –
IPR006671
SMART
SM00385
145 229 85 1.30E-28
IPR013763
Gene3D
G3DSA:1.10.472.10
230 356 127 2.20E-45
IPR013763
CDD
cd00043
236 323 88 7.09E-17 –
SUPERFAMILY
SSF47954
237 355 119 1.79E-38
IPR013763
SMART
SM01332
238 355 118 2.90E-38
IPR004367
Pfam
PF02984
238 353 116 2.80E-36
IPR004367
SMART
SM00385
242 324 83 1.70E-18
IPR013763

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0042025
Cellular component Host cell nucleus A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Subterm of

Genome browser

LORE1 insertions 18

Expression data

Expression pattern

Expression pattern of Lj1g3v3329970.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3329970.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.