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Lj1g3v3608310.1

Overview

Field Value
Gene ID Lj1g3v3608310
Transcript ID Lj1g3v3608310.1
Lotus japonicus genome version MG20 v3.0
Description Histone H3 K4-specific methyltransferase SET7/9 family protein [Theobroma cacao] gi|508704657|gb|EOX96553.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23084:SF156
1 230 230 3.30E-174 –
PANTHER
PTHR23084
1 230 230 3.30E-174 –
SMART
SM00698
3 24 22 0.1
IPR003409
SUPERFAMILY
SSF82185
4 87 84 1.44E-21 –
Gene3D
G3DSA:2.20.110.10
4 94 91 2.00E-29 –
Pfam
PF02493
5 27 23 3.90E-06
IPR003409
SMART
SM00698
26 47 22 5.80E-05
IPR003409
Pfam
PF02493
28 50 23 2.80E-06
IPR003409
SMART
SM00698
49 70 22 0.0016
IPR003409
Pfam
PF02493
51 73 23 9.90E-07
IPR003409
SUPERFAMILY
SSF82185
69 153 85 3.53E-22 –
SMART
SM00698
72 93 22 9.60E-04
IPR003409
Pfam
PF02493
74 96 23 1.20E-04
IPR003409
SMART
SM00698
95 116 22 9.60E-07
IPR003409
Gene3D
G3DSA:2.20.110.10
95 151 57 2.50E-17 –
Pfam
PF02493
97 119 23 7.40E-07
IPR003409
SMART
SM00698
118 139 22 1.90E-04
IPR003409
Pfam
PF02493
120 141 22 6.50E-06
IPR003409

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj1g3v3608310.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3608310.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.