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Lj1g3v3646580.3

Overview

Field Value
Gene ID Lj1g3v3646580
Transcript ID Lj1g3v3646580.3
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: girdin-like [Cicer arietinum] gi|502181204|ref|XP_004516762.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 23 23
MobiDBLite 69 88 20
MobiDBLite 326 398 73
MobiDBLite 480 591 112
MobiDBLite 946 1001 56
MobiDBLite 1035 1086 52
MobiDBLite 1128 1161 34
MobiDBLite 1282 1359 78
MobiDBLite 1585 1613 29
MobiDBLite 1640 1661 22
Coils 1749 1769 21
MobiDBLite 1761 1832 72
MobiDBLite 1850 1893 44
Coils 1919 1939 21
MobiDBLite 2078 2168 91

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj1g3v3646580.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3646580.3, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.