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Lj1g3v4093250.1

Overview

Field Value
Gene ID Lj1g3v4093250
Transcript ID Lj1g3v4093250.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description mitotic cyclin [Sesbania rostrata] gi|1835260|emb|CAA99990.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF001771
1 292 292 7.80E-95 –
PANTHER
PTHR10177
1 82 82 2.50E-114 –
MobiDBLite
mobidb-lite
1 37 37 – –
PANTHER
PTHR10177:SF247
1 82 82 2.50E-114 –
PANTHER
PTHR10177:SF247
105 287 183 2.50E-114 –
PANTHER
PTHR10177
105 287 183 2.50E-114 –
SUPERFAMILY
SSF47954
182 291 110 5.10E-35
IPR013763
Pfam
PF00134
193 287 95 4.40E-31
IPR006671
Gene3D
G3DSA:1.10.472.10
208 287 80 2.70E-31
IPR013763
CDD
cd00043
221 286 66 5.54E-19 –
ProSitePatterns
PS00292
222 253 32 –
IPR006671
SMART
SM00385
227 298 72 3.70E-10
IPR013763

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj1g3v4093250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4093250.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.