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Lj2g3v1468280.2

Overview

Field Value
Gene ID Lj2g3v1468280
Transcript ID Lj2g3v1468280.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphoenolpyruvate carboxykinase [ATP] gi|356496541|ref|XP_003517125.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 74 74 – –
PANTHER
PTHR30031:SF4
63 651 589 0 –
PANTHER
PTHR30031
63 651 589 0 –
PIRSF
PIRSF006294
108 651 544 3.70E-256
IPR001272
Hamap
MF_00453
123 651 529 48.538
IPR001272
TIGRFAM
TIGR00224
127 650 524 6.80E-226
IPR001272
CDD
cd00484
128 648 521 0
IPR001272
SUPERFAMILY
SSF68923
128 326 199 1.92E-70
IPR008210
Pfam
PF01293
129 596 468 8.90E-214
IPR001272
Gene3D
G3DSA:3.40.449.10
129 326 198 2.40E-84
IPR008210
Gene3D
G3DSA:3.90.228.20
328 390 63 9.40E-127
IPR013035
SUPERFAMILY
SSF53795
328 650 323 7.20E-135 –
ProSitePatterns
PS00532
365 380 16 –
IPR015994
Gene3D
G3DSA:3.90.228.20
451 649 199 9.40E-127
IPR013035

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004611
Molecular function Phosphoenolpyruvate carboxykinase activity Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.
Subterm of
GO:0004612
Molecular function Phosphoenolpyruvate carboxykinase (ATP) activity Catalysis of the reaction: ATP + oxaloacetate = ADP + CO(2) + H(+) + phosphoenolpyruvate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006094
Biological process Gluconeogenesis The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.
Subterm of
GO:0017076
Molecular function Purine nucleotide binding Interacting selectively and non-covalently with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj2g3v1468280.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1468280.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.