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Lj2g3v1734480.1

Overview

Field Value
Gene ID Lj2g3v1734480
Transcript ID Lj2g3v1734480.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: soluble inorganic pyrophosphatase-like [Cicer arietinum] gi|502161182|ref|XP_004512066.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10286:SF10
20 204 185 9.00E-135 –
PANTHER
PTHR10286
20 204 185 9.00E-135
IPR008162
SUPERFAMILY
SSF50324
33 199 167 1.57E-58
IPR008162
Gene3D
G3DSA:3.90.80.10
33 200 168 2.00E-55
IPR008162
CDD
cd00412
52 192 141 2.94E-74
IPR008162
Pfam
PF00719
55 168 114 5.70E-41
IPR008162
ProSitePatterns
PS00387
102 108 7 –
IPR008162

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004427
Molecular function Inorganic diphosphatase activity Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006796
Biological process Phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj2g3v1734480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1734480.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.