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Lj2g3v1968260.1

Overview

Field Value
Gene ID Lj2g3v1968260
Transcript ID Lj2g3v1968260.1
Lotus japonicus genome version MG20 v3.0
Description VDAC2.1 [Lotus japonicus] gi|36957216|gb|AAQ87022.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11743:SF29
1 276 276 2.20E-173 –
PANTHER
PTHR11743
1 276 276 2.20E-173 –
Gene3D
G3DSA:2.40.160.10
1 275 275 1.40E-77
IPR023614
CDD
cd07306
5 275 271 2.95E-75 –
Pfam
PF01459
5 269 265 1.30E-60
IPR027246

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005741
Cellular component Mitochondrial outer membrane The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope.
Subterm of
GO:0055085
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj2g3v1968260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1968260.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.