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Lj2g3v2088040.1

Overview

Field Value
Gene ID Lj2g3v2088040
Transcript ID Lj2g3v2088040.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: mitochondrial substrate carrier family protein B-like [Glycine max] gi|356495713|ref|XP_003516718.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24089:SF267
1 333 333 9.40E-223 –
PANTHER
PTHR24089
1 333 333 9.40E-223 –
SUPERFAMILY
SSF103506
16 328 313 1.05E-80
IPR023395
ProSiteProfiles
PS50920
17 114 98 21.505
IPR018108
Pfam
PF00153
18 113 96 1.90E-20
IPR018108
Gene3D
G3DSA:1.50.40.10
19 332 314 2.10E-88
IPR023395
PRINTS
PR00926
22 35 14 7.70E-34
IPR002067
PRINTS
PR00926
35 49 15 7.70E-34
IPR002067
PRINTS
PR00926
89 109 21 7.70E-34
IPR002067
ProSiteProfiles
PS50920
130 218 89 28.37
IPR018108
Pfam
PF00153
130 222 93 5.20E-25
IPR018108
PRINTS
PR00926
145 163 19 7.70E-34
IPR002067
PRINTS
PR00926
191 209 19 7.70E-34
IPR002067
Pfam
PF00153
232 333 102 9.40E-25
IPR018108
ProSiteProfiles
PS50920
233 332 100 24.701
IPR018108
PRINTS
PR00926
242 264 23 7.70E-34
IPR002067

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005347
Molecular function ATP transmembrane transporter activity Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other.
Subterm of
GO:0055085
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj2g3v2088040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2088040.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.