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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2221850 |
| Transcript ID | Lj2g3v2221850.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Glycine max] gi|356500843|ref|XP_003519240.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 428 | 428 | 7.60E-225 | – | |
| PANTHER | 1 | 428 | 428 | 7.60E-225 | – | |
| ProSiteProfiles | 1 | 47 | 47 | 9.3 | ||
| SMART | 4 | 47 | 44 | 4.20E-07 | ||
| CDD | 4 | 47 | 44 | 1.94E-07 | – | |
| ProSiteProfiles | 43 | 90 | 48 | 9.158 | ||
| Pfam | 46 | 90 | 45 | 3.70E-05 | ||
| CDD | 47 | 90 | 44 | 5.83E-04 | – | |
| SMART | 48 | 90 | 43 | 0.15 | ||
| MobiDBLite | 134 | 183 | 50 | – | – | |
| Pfam | 371 | 413 | 43 | 8.00E-16 | ||
| ProSiteProfiles | 371 | 413 | 43 | 15.408 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj2g3v2221850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2221850.1, powered by CORGI.
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