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Lj3g3v0464720.1

Overview

Field Value
Gene ID Lj3g3v0464720
Transcript ID Lj3g3v0464720.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: MLP-like protein 43-like [Glycine max] gi|356537226|ref|XP_003537130.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31338
4 140 137 5.50E-56 –
PANTHER
PTHR31338:SF16
4 140 137 5.50E-56 –
SMART
SM01037
4 140 137 2.20E-22
IPR000916
SUPERFAMILY
SSF55961
5 37 33 1.54E-25 –
Pfam
PF00407
5 139 135 1.10E-34
IPR000916
Gene3D
G3DSA:3.30.530.20
5 139 135 1.30E-34
IPR023393
CDD
cd07816
7 138 132 2.72E-25 –
SUPERFAMILY
SSF55961
71 139 69 1.54E-25 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006952
Biological process Defense response Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj3g3v0464720.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0464720.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.