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Lj3g3v0938030.2

Overview

Field Value
Gene ID Lj3g3v0938030
Transcript ID Lj3g3v0938030.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: nuclear-pore anchor-like [Glycine max] gi|356528625|ref|XP_003532900.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 1151 1151 2.20E-219
Coils 17 37 21
Coils 41 136 96
Coils 158 189 32
Coils 200 238 39
Pfam 263 390 128 5.00E-25
Coils 278 309 32
Coils 327 347 21
Coils 352 379 28
Coils 437 457 21
Coils 485 505 21
Coils 513 568 56
Coils 598 632 35
Coils 647 688 42
Coils 701 735 35
Coils 747 781 35
MobiDBLite 860 1287 428

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Protein import into nucleus The directed movement of a protein from the cytoplasm to the nucleus.

Expression data

Expression pattern

Expression pattern of Lj3g3v0938030.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0938030.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.