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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2224720 |
| Transcript ID | Lj3g3v2224720.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Ran BP2/NZF zinc finger-like superfamily protein isoform 1 [Theobroma cacao] gi|508779271|gb|EOY26527.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 148 | 148 | 2.30E-92 | – | |
| PANTHER | 1 | 148 | 148 | 2.30E-92 | – | |
| SUPERFAMILY | 2 | 33 | 32 | 1.40E-08 | ||
| Gene3D | 3 | 30 | 28 | 5.70E-12 | ||
| ProSiteProfiles | 3 | 32 | 30 | 9.348 | ||
| Pfam | 3 | 28 | 26 | 0.002 | ||
| SMART | 5 | 29 | 25 | 3.20E-05 | ||
| ProSitePatterns | 7 | 26 | 20 | – | ||
| SUPERFAMILY | 52 | 88 | 37 | 1.26E-11 | ||
| Gene3D | 53 | 89 | 37 | 4.80E-16 | ||
| ProSiteProfiles | 58 | 89 | 32 | 9.969 | ||
| Pfam | 58 | 85 | 28 | 1.40E-05 | ||
| SMART | 60 | 86 | 27 | 7.00E-05 | ||
| ProSitePatterns | 62 | 83 | 22 | – | ||
| SUPERFAMILY | 108 | 147 | 40 | 2.43E-12 | ||
| Gene3D | 109 | 147 | 39 | 2.60E-16 | ||
| ProSiteProfiles | 116 | 147 | 32 | 10.444 | ||
| Pfam | 116 | 145 | 30 | 2.30E-09 | ||
| SMART | 118 | 144 | 27 | 2.20E-05 | ||
| ProSitePatterns | 120 | 141 | 22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj3g3v2224720.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2224720.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.