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Lj3g3v2414300.1

Overview

Field Value
Gene ID Lj3g3v2414300
Transcript ID Lj3g3v2414300.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: mitochondrial substrate carrier family protein B-like [Glycine max] gi|356520304|ref|XP_003528803.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24089:SF329
22 348 327 3.00E-233 –
PANTHER
PTHR24089
22 348 327 3.00E-233 –
ProSiteProfiles
PS50920
40 127 88 22.985
IPR018108
Pfam
PF00153
41 127 87 3.80E-23
IPR018108
SUPERFAMILY
SSF103506
41 343 303 5.23E-85
IPR023395
Gene3D
G3DSA:1.50.40.10
42 347 306 8.70E-93
IPR023395
PRINTS
PR00926
45 58 14 4.00E-35
IPR002067
PRINTS
PR00926
58 72 15 4.00E-35
IPR002067
PRINTS
PR00926
102 122 21 4.00E-35
IPR002067
Pfam
PF00153
143 234 92 1.30E-25
IPR018108
ProSiteProfiles
PS50920
143 231 89 27.941
IPR018108
PRINTS
PR00926
158 176 19 4.00E-35
IPR002067
PRINTS
PR00926
204 222 19 4.00E-35
IPR002067
Pfam
PF00153
245 348 104 2.50E-24
IPR018108
ProSiteProfiles
PS50920
246 347 102 25.752
IPR018108
PRINTS
PR00926
255 277 23 4.00E-35
IPR002067

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005347
Molecular function ATP transmembrane transporter activity Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other.
Subterm of
GO:0055085
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj3g3v2414300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2414300.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.