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Lj3g3v3430170.2

Overview

Field Value
Gene ID Lj3g3v3430170
Transcript ID Lj3g3v3430170.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ceramide kinase-like [Glycine max] gi|356510332|ref|XP_003523893.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 139 139 4.50E-260
PANTHER 1 139 139 4.50E-260
ProSiteProfiles 50 258 209 30.86
SUPERFAMILY 51 131 81 7.68E-50
Pfam 54 135 82 9.40E-16
SMART 54 177 124 0.0041
PANTHER 199 504 306 4.50E-260
PANTHER 199 504 306 4.50E-260
SUPERFAMILY 207 319 113 7.68E-50
SUPERFAMILY 385 501 117 7.68E-50

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.

Expression data

Expression pattern

Expression pattern of Lj3g3v3430170.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3430170.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.