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Lj4g3v0099350.1

Overview

Field Value
Gene ID Lj4g3v0099350
Transcript ID Lj4g3v0099350.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] gi|356564452|ref|XP_003550468.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 575 575 4.10E-136
PANTHER 1 575 575 4.10E-136
MobiDBLite 285 359 75
Coils 375 395 21
MobiDBLite 380 441 62
SUPERFAMILY 449 488 40 7.97E-06
MobiDBLite 510 711 202
MobiDBLite 720 739 20

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj4g3v0099350.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0099350.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.