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Lj4g3v0473400.2

Overview

Field Value
Gene ID Lj4g3v0473400
Transcript ID Lj4g3v0473400.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: cytochrome P450 82A1-like [Glycine max] gi|356519098|ref|XP_003528211.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24298:SF102
1 328 328 3.00E-183 –
PANTHER
PTHR24298
1 328 328 3.00E-183 –
SUPERFAMILY
SSF48264
6 324 319 4.32E-87
IPR001128
Gene3D
G3DSA:1.10.630.10
7 326 320 1.20E-90
IPR001128
Pfam
PF00067
9 313 305 5.20E-71
IPR001128
Coils
Coil
53 73 21 – –
PRINTS
PR00463
118 135 18 7.90E-32
IPR002401
PRINTS
PR00385
129 146 18 4.00E-14
IPR001128
PRINTS
PR00463
138 164 27 7.90E-32
IPR002401
PRINTS
PR00463
181 199 19 7.90E-32
IPR002401
PRINTS
PR00385
182 193 12 4.00E-14
IPR001128
PRINTS
PR00463
222 246 25 7.90E-32
IPR002401
PRINTS
PR00463
260 270 11 7.90E-32
IPR002401
PRINTS
PR00385
261 270 10 4.00E-14
IPR001128
ProSitePatterns
PS00086
263 272 10 –
IPR017972
PRINTS
PR00385
270 281 12 4.00E-14
IPR001128
PRINTS
PR00463
270 293 24 7.90E-32
IPR002401

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005506
Molecular function Iron ion binding Interacting selectively and non-covalently with iron (Fe) ions.
Subterm of
GO:0016705
Molecular function Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
Subterm of
GO:0020037
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj4g3v0473400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0473400.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.