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Lj4g3v1120500.1

Overview

Field Value
Gene ID Lj4g3v1120500
Transcript ID Lj4g3v1120500.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: soluble inorganic pyrophosphatase 1, chloroplastic-like isoform X2 [Cicer arietinum] gi|502077416|ref|XP_004485644.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10286:SF3
44 291 248 1.60E-160 –
PANTHER
PTHR10286
44 291 248 1.60E-160
IPR008162
SUPERFAMILY
SSF50324
57 287 231 2.62E-84
IPR008162
Gene3D
G3DSA:3.90.80.10
57 287 231 5.20E-94
IPR008162
CDD
cd00412
94 273 180 1.49E-62
IPR008162
Pfam
PF00719
98 275 178 8.00E-45
IPR008162

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004427
Molecular function Inorganic diphosphatase activity Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006796
Biological process Phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj4g3v1120500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1120500.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.