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Lj4g3v1315020.1

Overview

Field Value
Gene ID Lj4g3v1315020
Transcript ID Lj4g3v1315020.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: flavonoid 3'-monooxygenase-like [Glycine max] gi|356565311|ref|XP_003550885.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24298
19 518 500 0 –
PANTHER
PTHR24298:SF114
19 518 500 0 –
Gene3D
G3DSA:1.10.630.10
43 514 472 1.00E-137
IPR001128
Pfam
PF00067
52 505 454 2.70E-110
IPR001128
SUPERFAMILY
SSF48264
52 514 463 1.10E-130
IPR001128
PRINTS
PR00463
79 98 20 3.30E-48
IPR002401
PRINTS
PR00463
103 124 22 3.30E-48
IPR002401
PRINTS
PR00463
195 213 19 3.30E-48
IPR002401
PRINTS
PR00463
310 327 18 3.30E-48
IPR002401
PRINTS
PR00385
321 338 18 1.80E-10
IPR001128
PRINTS
PR00463
330 356 27 3.30E-48
IPR002401
PRINTS
PR00463
373 391 19 3.30E-48
IPR002401
PRINTS
PR00385
374 385 12 1.80E-10
IPR001128
PRINTS
PR00463
414 438 25 3.30E-48
IPR002401
PRINTS
PR00463
450 460 11 3.30E-48
IPR002401
PRINTS
PR00385
451 460 10 1.80E-10
IPR001128
ProSitePatterns
PS00086
453 462 10 –
IPR017972
PRINTS
PR00463
460 483 24 3.30E-48
IPR002401
PRINTS
PR00385
460 471 12 1.80E-10
IPR001128

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005506
Molecular function Iron ion binding Interacting selectively and non-covalently with iron (Fe) ions.
Subterm of
GO:0016705
Molecular function Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
Subterm of
GO:0020037
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj4g3v1315020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1315020.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.