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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2137060 |
| Transcript ID | Lj4g3v2137060.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | TBC1 domain family member [Medicago truncatula] gi|357479543|ref|XP_003610057.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 34 | 34 | – | – | |
| SMART | 24 | 423 | 400 | 1.10E-20 | ||
| ProSiteProfiles | 33 | 377 | 345 | 23.973 | ||
| PANTHER | 37 | 89 | 53 | 1.30E-126 | – | |
| Gene3D | 37 | 54 | 18 | 7.70E-21 | – | |
| SUPERFAMILY | 37 | 72 | 36 | 2.62E-26 | ||
| PANTHER | 37 | 89 | 53 | 1.30E-126 | – | |
| Coils | 62 | 82 | 21 | – | – | |
| MobiDBLite | 87 | 108 | 22 | – | – | |
| SUPERFAMILY | 111 | 184 | 74 | 2.62E-26 | ||
| Gene3D | 112 | 184 | 73 | 7.70E-21 | – | |
| Pfam | 124 | 184 | 61 | 5.00E-11 | ||
| PANTHER | 126 | 187 | 62 | 1.30E-126 | – | |
| PANTHER | 126 | 187 | 62 | 1.30E-126 | – | |
| PANTHER | 275 | 378 | 104 | 1.30E-126 | – | |
| PANTHER | 275 | 378 | 104 | 1.30E-126 | – | |
| Gene3D | 277 | 288 | 12 | 7.70E-21 | – | |
| SUPERFAMILY | 277 | 337 | 61 | 2.62E-26 | ||
| SUPERFAMILY | 313 | 452 | 140 | 1.49E-29 | ||
| Pfam | 319 | 378 | 60 | 1.10E-10 | ||
| PANTHER | 401 | 601 | 201 | 1.30E-126 | – | |
| PANTHER | 401 | 601 | 201 | 1.30E-126 | – | |
| MobiDBLite | 534 | 591 | 58 | – | – | |
| MobiDBLite | 624 | 653 | 30 | – | – | |
| MobiDBLite | 724 | 761 | 38 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj4g3v2137060.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2137060.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.