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Lj4g3v2883320.1

Overview

Field Value
Gene ID Lj4g3v2883320
Transcript ID Lj4g3v2883320.1
Related isoforms 3
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: MORC family CW-type zinc finger protein 4-like [Cicer arietinum] gi|502139455|ref|XP_004503774.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23336
1 425 425 4.40E-294 –
PANTHER
PTHR23336:SF7
1 425 425 4.40E-294 –
SUPERFAMILY
SSF55874
5 99 95 2.81E-06
IPR003594
Gene3D
G3DSA:3.30.565.10
5 96 92 4.10E-09
IPR003594
Pfam
PF13589
8 72 65 5.00E-08 –
SUPERFAMILY
SSF55874
146 168 23 2.81E-06
IPR003594
Gene3D
G3DSA:3.30.565.10
146 159 14 4.10E-09
IPR003594
MobiDBLite
mobidb-lite
362 503 142 – –
Coils
Coil
513 533 21 – –
Coils
Coil
542 576 35 – –
Coils
Coil
588 615 28 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj4g3v2883320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2883320.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.