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Lj4g3v3002650.1

Overview

Field Value
Gene ID Lj4g3v3002650
Transcript ID Lj4g3v3002650.1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 6 130 125 4.40E-30
PANTHER 6 130 125 4.40E-30
Coils 7 48 42
Coils 56 97 42
Coils 102 150 49
Coils 172 199 28
Coils 211 241 31
PANTHER 233 310 78 4.40E-30
PANTHER 233 310 78 4.40E-30
Coils 285 305 21
Coils 317 344 28
PANTHER 349 390 42 4.40E-30
PANTHER 349 390 42 4.40E-30
Coils 359 386 28
PANTHER 434 494 61 4.40E-30
PANTHER 434 494 61 4.40E-30
Coils 448 486 39
Coils 490 510 21
PANTHER 516 564 49 4.40E-30
PANTHER 516 564 49 4.40E-30

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj4g3v3002650.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v3002650.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.